Gene: AT5G06480

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G06480
  • Transcript Identifier AT5G06480.1
  • Gene Type Coding gene
  • Location Chr5 : 1976219-1977231 : negative

Gene Family Information

  • ID HOM05D002139
  • #Genes/#Species 313/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G06480.1
  • uniprot Q9FG22

Descriptions

  • Description Immunoglobulin E-set superfamily protein
  • Computational description Immunoglobulin E-set superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), MD-2-related lipid-recognition (InterPro:IPR003172); BEST Arabidopsis thaliana protein match is: MD-2-related lipid recognition domain-containing protein / ML domain-containing protein (TAIR:AT3G11780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032366
IEA
Gene Ontologyintracellular sterol transport
GO:0032366
IEA
InterProintracellular sterol transport
GO:0015918
IBA
Gene Ontologysterol transport1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032934
IBA
Gene Ontologysterol binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014756 Immunoglobulin E-set
IPR003172 MD-2-related lipid-recognition domain
IPR033917 ML domain, phosphatidylinositol/phosphatidylglycerol transfer protein
IPR039670 Sterol transport protein NPC2-like
Mapman id Description
35.1 not assigned.annotated