Gene: AT5G06340

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G06340
  • Transcript Identifier AT5G06340.1
  • Gene Type Coding gene
  • Location Chr5 : 1936467-1937911 : positive

Gene Family Information

  • ID HOM05D002189
  • #Genes/#Species 306/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G06340.1
  • symbol NUDX27
  • Alias ATNUDX27,nudix hydrolase homolog 27
  • uniprot Q9FNH4

Descriptions

  • Description nudix hydrolase homolog 27
  • Computational description nudix hydrolase homolog 27 (NUDX27); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 26 (TAIR:AT3G10620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006753
IBA
Gene Ontologynucleoside phosphate metabolic process1
GO:0019693
IBA
Gene Ontologyribose phosphate metabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034432
IDA
IBA
Gene Ontologybis(5'-adenosyl)-pentaphosphatase activity1 2
GO:0008893
IBA
Gene Ontologyguanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity1
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA
ISM, IBA
Gene Ontologychloroplast1 2
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000086 NUDIX hydrolase domain
IPR020476 NUDIX hydrolase
IPR022927 RNA pyrophosphohydrolase RppH
IPR015797 NUDIX hydrolase-like domain superfamily
Mapman id Description
35.1 not assigned.annotated