Gene: AT5G06100

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G06100
  • Transcript Identifier AT5G06100.2
  • Gene Type Coding gene
  • Location Chr5 : 1838555-1840386 : positive

Gene Family Information

  • ID HOM05D000008
  • #Genes/#Species 9932/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G06100.2
  • symbol MYB33
  • Alias ATMYB33
  • uniprot Q8W1W6

Descriptions

  • Description myb domain protein 33
  • Computational description myb domain protein 33 (MYB33); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 65 (TAIR:AT3G11440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Computational description myb domain protein 33 (MYB33); CONTAINS InterPro DOMAIN/s: Transcription factor, GAMYB (InterPro:IPR016310), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 65 (TAIR:AT3G11440.1); Has 8918 Blast hits to 8315 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 726; Fungi - 466; Plants - 5984; Viruses - 3; Other Eukaryotes - 1739 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043068
IMP
Gene Ontologypositive regulation of programmed cell death1
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0030154
IEA
GOA Databasecell differentiation
GO:0009908
IEA
GOA Databaseflower development
GO:0009735
IEP
Gene Ontologyresponse to cytokinin2
GO:0009723
IEP
Gene Ontologyresponse to ethylene2
GO:1990019
IMP
Gene Ontologyprotein storage vacuole organization1
GO:0045926
IMP
Gene Ontologynegative regulation of growth1
GO:0045893
IMP
Gene Ontologypositive regulation of transcription, DNA-templated1
GO:0008285
IMP
Gene Ontologynegative regulation of cell population proliferation1
GO:0009789
IMP
Gene Ontologypositive regulation of abscisic acid-activated signaling pathway3
GO:0048655
IMP
Gene Ontologyanther wall tapetum morphogenesis4
GO:0048653
IMP
Gene Ontologyanther development4
GO:0048235
IGI
Gene Ontologypollen sperm cell differentiation4
GO:0009740
TAS
Gene Ontologygibberellic acid mediated signaling pathway5
GO:0009739
IEP
Gene Ontologyresponse to gibberellin5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0043565
IDA
Gene Ontologysequence-specific DNA binding6
GO:0003700
ISS
TAS
Gene OntologyDNA-binding transcription factor activity5 7

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
TAS
Gene Ontologynucleus5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR016310 Transcription factor GAMYB-like
IPR009057 Homeobox-like domain superfamily
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)