Gene: AT5G04250

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G04250
  • Transcript Identifier AT5G04250.1
  • Gene Type Coding gene
  • Location Chr5 : 1176397-1178492 : positive

Gene Family Information

  • ID HOM05D001005
  • #Genes/#Species 602/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G04250.1
  • uniprot Q8LBW2

Descriptions

  • Description Cysteine proteinases superfamily protein
  • Computational description Cysteine proteinases superfamily protein; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT5G03330.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
ISS
Gene Ontologyproteolysis
GO:0016579
IBA
Gene Ontologyprotein deubiquitination1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004843
IEA
GOA Databasethiol-dependent deubiquitinase
GO:0004843
IBA
Gene Ontologythiol-dependent deubiquitinase1
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038765 Papain-like cysteine peptidase superfamily
IPR003323 OTU domain
Mapman id Description
19.2.3.1.2.5 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.OTU deubiquitinase activities.deubiquitinase (OTU6-12)