Gene: AT5G03520

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G03520
  • Transcript Identifier AT5G03520.1
  • Gene Type Coding gene
  • Location Chr5 : 883679-885158 : positive

Gene Family Information

  • ID HOM05D000255
  • #Genes/#Species 1677/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G03520.1
  • symbol RAB8C
  • Alias ATRAB-E1D,ARABIDOPSIS RAB HOMOLOG E1D,ATRAB8C,RAB GTPase homolog 8C,ATRABE1D,RAB-E1D,RAB HOMOLOG E1D
  • uniprot Q9LZD4

Descriptions

  • Description RAB GTPase homolog 8C
  • Computational description RAB GTPase homolog 8C (RAB8C); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1E (TAIR:AT3G09900.1); Has 29771 Blast hits to 29709 proteins in 824 species: Archae - 21; Bacteria - 191; Metazoa - 15611; Fungi - 4242; Plants - 3476; Viruses - 20; Other Eukaryotes - 6210 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
GOA Databaseprotein transport
GO:0009306
IBA
Gene Ontologyprotein secretion1
GO:0006904
IBA
Gene Ontologyvesicle docking involved in exocytosis1
GO:0017157
IBA
Gene Ontologyregulation of exocytosis1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
Gene OntologyGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000139
IEA
GOA DatabaseGolgi membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005794
IDA
Gene OntologyGolgi apparatus3
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005886
IDA, HDA
IBA
Gene Ontologyplasma membrane1 3 4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001806 Small GTPase
IPR005225 Small GTP-binding protein domain
Mapman id Description
22.3.4.1.5 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.E-class RAB GTPase