Gene: AT5G03270

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G03270
  • Transcript Identifier AT5G03270.1
  • Gene Type Coding gene
  • Location Chr5 : 781870-784077 : positive

Gene Family Information

  • ID HOM05D000450
  • #Genes/#Species 1160/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G03270.1
  • symbol LOG6
  • full_name LONELY GUY 6
  • uniprot Q9LYV8

Descriptions

  • Description lysine decarboxylase family protein
  • Computational description lysine decarboxylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lysine biosynthetic process via diaminopimelate; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 4676 Blast hits to 4675 proteins in 1444 species: Archae - 14; Bacteria - 3212; Metazoa - 10; Fungi - 132; Plants - 382; Viruses - 0; Other Eukaryotes - 926 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009691
IEA
GOA Databasecytokinin biosynthetic process
GO:0009691
IBA
Gene Ontologycytokinin biosynthetic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016799
IBA
Gene Ontologyhydrolase activity, hydrolyzing N-glycosyl compounds1
GO:0102682
IEA
GOA DatabaseN6-(Delta2-isopentenyl)-adenosine 5'-monophosphate phosphoribohydrolase activity
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IBA
Gene Ontologycytosol1
GO:0005634
IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031100 LOG family
IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG
Mapman id Description
11.4.1.2 Phytohormone action.cytokinin.biosynthesis.cytokinin phosphoribohydrolase