Gene: AT5G03220

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G03220
  • Transcript Identifier AT5G03220.1
  • Gene Type Coding gene
  • Location Chr5 : 767617-768584 : negative

Gene Family Information

  • ID HOM05D004349
  • #Genes/#Species 164/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G03220.1
  • uniprot Q9LYW3

Descriptions

  • Description Mediator complex, subunit Med7
  • Computational description Mediator complex, subunit Med7; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med7 (InterPro:IPR009244); BEST Arabidopsis thaliana protein match is: Mediator complex, subunit Med7 (TAIR:AT5G03500.3); Has 403 Blast hits to 401 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 158; Plants - 58; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009704
IMP
Gene Ontologyde-etiolation1
GO:0051510
IMP, IGI
Gene Ontologyregulation of unidimensional cell growth1
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II2
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003712
IEA
Gene Ontologytranscription coregulator activity
GO:0003712
IEA
InterProtranscription coregulator activity
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0016592
IEA
GOA Databasemediator complex
GO:0016592
IDA
IBA
Gene Ontologymediator complex2 3
GO:0016592
IEA
InterPromediator complex
GO:0070847
IBA
Gene Ontologycore mediator complex2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037212 Mediator complex, subunit Med7/Med21-like
IPR009244 Mediator complex, subunit Med7
IPR044888 Mediator complex, subunit Med7 superfmaily
Mapman id Description
15.3.4.4.2.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.middle module.component MED7