Gene: AT5G02600

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G02600
  • Transcript Identifier AT5G02600.2
  • Gene Type Coding gene
  • Location Chr5 : 584486-586855 : negative

Gene Family Information

  • ID HOM05D000999
  • #Genes/#Species 606/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G02600.2
  • symbol NAKR1
  • Alias NPCC6,nuclear-enriched phloem companion cell gene 6
  • full_name SODIUM POTASSIUM ROOT DEFECTIVE 1
  • uniprot Q8LDS4

Descriptions

  • Description Heavy metal transport/detoxification superfamily protein
  • Computational description Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT2G37390.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Computational description Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT2G37390.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009908
IMP
Gene Ontologyflower development1
GO:0010015
IMP
Gene Ontologyroot morphogenesis1
GO:0010233
IMP
Gene Ontologyphloem transport1
GO:0055078
IMP
Gene Ontologysodium ion homeostasis1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IDA
IEA
Gene Ontologymetal ion binding1
GO:0046872
IEA
InterPrometal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
Gene Ontologynucleus1
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
Gene Ontologycytoplasm1
GO:0005783
IEA
GOA Databaseendoplasmic reticulum

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006121 Heavy metal-associated domain, HMA
IPR036163 Heavy metal-associated domain superfamily
IPR044526 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3
Mapman id Description
35.1 not assigned.annotated