Gene: AT5G02260

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G02260
  • Transcript Identifier AT5G02260.1
  • Gene Type Coding gene
  • Location Chr5 : 463224-464840 : positive

Gene Family Information

  • ID HOM05D000114
  • #Genes/#Species 2914/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G02260.1
  • symbol EXPA9
  • Alias ATEXP9,ATEXPA9,expansin A9,ATHEXP ALPHA 1.10,EXP9
  • uniprot Q9LZ99

Descriptions

  • Description expansin A9
  • Computational description expansin A9 (EXPA9); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: Barwin-like endoglucanases superfamily protein (TAIR:AT2G37640.1); Has 2170 Blast hits to 2166 proteins in 155 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 2091; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009664
IEA
Gene Ontologyplant-type cell wall organization
GO:0009664
IEA
InterProplant-type cell wall organization
GO:0009826
NAS
Gene Ontologyunidimensional cell growth1
GO:0009828
NAS
Gene Ontologyplant-type cell wall loosening1
GO:0071555
IEA
GOA Databasecell wall organization

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005576
IEA
InterProextracellular region
GO:0016020
IEA
GOA Databasemembrane
GO:0005618
IEA
GOA Databasecell wall

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036908 RlpA-like domain superfamily
IPR036749 Expansin, cellulose-binding-like domain superfamily
IPR007112 Expansin/pollen allergen, DPBB domain
IPR007117 Expansin, cellulose-binding-like domain
IPR009009 RlpA-like protein, double-psi beta-barrel domain
IPR007118 Expansin/Lol pI
IPR002963 Expansin
Mapman id Description
21.4.2.1 Cell wall organisation.cell wall proteins.expansin activities.alpha-class expansin