Gene: AT5G01600

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G01600
  • Transcript Identifier AT5G01600.1
  • Gene Type Coding gene
  • Location Chr5 : 228149-229594 : negative

Gene Family Information

  • ID HOM05D001505
  • #Genes/#Species 420/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G01600.1
  • symbol FER1
  • Alias ATFER1,ARABIDOPSIS THALIANA FERRETIN 1
  • uniprot Q39101

Descriptions

  • Description ferretin 1
  • Computational description ferretin 1 (FER1); FUNCTIONS IN: ferric iron binding, iron ion binding; INVOLVED IN: in 12 processes; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ferritin, N-terminal (InterPro:IPR001519), Ferritin-related (InterPro:IPR012347), Ferritin-like (InterPro:IPR009040), Ferritin, conserved site (InterPro:IPR014034), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Ferritin/Dps protein (InterPro:IPR008331); BEST Arabidopsis thaliana protein match is: ferritin 4 (TAIR:AT2G40300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006880
IBA
Gene Ontologyintracellular sequestering of iron ion1
GO:0006879
IEA
GOA Databasecellular iron ion homeostasis
GO:0006879
IEA
InterProcellular iron ion homeostasis
GO:0006826
IEA
GOA Databaseiron ion transport
GO:0006826
IGI
Gene Ontologyiron ion transport2
GO:0006826
IEA
InterProiron ion transport
GO:0010039
IEP
Gene Ontologyresponse to iron ion3
GO:0042542
IEP
Gene Ontologyresponse to hydrogen peroxide3
GO:0009409
IEP
Gene Ontologyresponse to cold4
GO:0009617
IMP, IEP
Gene Ontologyresponse to bacterium5
GO:0000302
IGI
Gene Ontologyresponse to reactive oxygen species2
GO:0009908
IGI
Gene Ontologyflower development2
GO:0015979
IGI
Gene Ontologyphotosynthesis2
GO:0048366
IGI
Gene Ontologyleaf development2
GO:0055072
IGI
Gene Ontologyiron ion homeostasis2
GO:0010043
IEP
Gene Ontologyresponse to zinc ion6

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008198
IBA
Gene Ontologyferrous iron binding1
GO:0008199
IEA
GOA Databaseferric iron binding
GO:0008199
IBA
Gene Ontologyferric iron binding1
GO:0008199
IEA
InterProferric iron binding
GO:0019904
IPI
GOA Databaseprotein domain specific binding
GO:0042802
IPI
Gene Ontologyidentical protein binding7
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0005506
TAS
Gene Ontologyiron ion binding3
GO:0004322
IEA
Gene Ontologyferroxidase activity
GO:0005515
IPI
Gene Ontologyprotein binding7

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISS, ISM
Gene Ontologychloroplast8 9
GO:0005737
IBA
Gene Ontologycytoplasm1
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma10
GO:0005739
IDA
GOA Databasemitochondrion
GO:0005739
HDA
Gene Ontologymitochondrion11
GO:0009535
IDA
GOA Databasechloroplast thylakoid membrane
GO:0009535
HDA
Gene Ontologychloroplast thylakoid membrane12
GO:0009579
IDA
GOA Databasethylakoid
GO:0009579
HDA
Gene Ontologythylakoid12
GO:0009536
IEA
GOA Databaseplastid
GO:0005886
HDA
Gene Ontologyplasma membrane13

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012347 Ferritin-like
IPR008331 Ferritin/DPS protein domain
IPR001519 Ferritin
IPR009078 Ferritin-like superfamily
Mapman id Description
25.4.2.4.1 Nutrient uptake.metal homeostasis.iron.iron storage.non-haem ferritin