Gene: AT4G38900
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G38900
- Transcript Identifier AT4G38900.2
- Gene Type Coding gene
- Location Chr4 : 18139564-18141520 : negative
Gene Family Information
- ID HOM05D000516
- #Genes/#Species 1046/98
- Phylogenetic origin
- ID ORTHO05D000409
- #Genes/#Species 973/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G38900.2
- Alias bZIP29,basic leucine-zipper 29
- uniprot Q8H1F0
Descriptions
- Description Basic-leucine zipper (bZIP) transcription factor family protein
- Computational description Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 2903 Blast hits to 2067 proteins in 270 species: Archae - 2; Bacteria - 286; Metazoa - 482; Fungi - 174; Plants - 835; Viruses - 0; Other Eukaryotes - 1124 (source: NCBI BLink).
- Computational description Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 3605 Blast hits to 2736 proteins in 325 species: Archae - 8; Bacteria - 323; Metazoa - 540; Fungi - 250; Plants - 1223; Viruses - 1; Other Eukaryotes - 1260 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IDA | Gene Ontology | regulation of transcription, DNA-templated | 1 |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0040008 | IEA | GOA Database | regulation of growth | |
| GO:0090567 | IMP | Gene Ontology | reproductive shoot system development | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043565 | IDA | Gene Ontology | sequence-specific DNA binding | 1 |
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 3 |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0042803 | IPI | Gene Ontology | protein homodimerization activity | 1 |
| GO:0000976 | IPI | Gene Ontology | transcription cis-regulatory region binding | 4 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM | Gene Ontology | nucleus | 5 |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | IDA | Gene Ontology | cytoplasm | 5 |
| GO:0005829 | IDA | Gene Ontology | cytosol | 5 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.4.1 | RNA biosynthesis.transcriptional regulation.bZIP transcription factor superfamily.transcription factor (bZIP) |