Gene: AT4G38420

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G38420
  • Transcript Identifier AT4G38420.1
  • Gene Type Coding gene
  • Location Chr4 : 17982840-17985173 : positive

Gene Family Information

  • ID HOM05D000201
  • #Genes/#Species 1953/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G38420.1
  • symbol sks9
  • uniprot Q8VYB3

Descriptions

  • Description SKU5 similar 9
  • Computational description SKU5 similar 9 (sks9); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plant-type cell wall; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 10 (TAIR:AT4G28090.1); Has 5024 Blast hits to 4968 proteins in 899 species: Archae - 4; Bacteria - 1507; Metazoa - 261; Fungi - 1826; Plants - 1281; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005507
IEA
Gene Ontologycopper ion binding
GO:0005507
IEA
InterProcopper ion binding
GO:0016491
IBA
IEA
Gene Ontologyoxidoreductase activity1
GO:0016491
IEA
InterProoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0009505
IDA
GOA Databaseplant-type cell wall
GO:0009505
HDA
Gene Ontologyplant-type cell wall2
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008972 Cupredoxin
IPR034273 Ascorbate oxidase homologue, first cupredoxin domain
IPR011707 Multicopper oxidase, N-termianl
IPR011706 Multicopper oxidase, C-terminal
IPR001117 Multicopper oxidase, type 1
IPR045087 Multicopper oxidase
Mapman id Description
50.1.10 Enzyme classification.EC_1 oxidoreductases.EC_1.10 oxidoreductase acting on diphenol or related substance as donor