Gene: AT4G29930

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G29930
  • Transcript Identifier AT4G29930.1
  • Gene Type Coding gene
  • Location Chr4 : 14644108-14647449 : positive

Gene Family Information

  • ID HOM05D002911
  • #Genes/#Species 237/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G29930.1
  • uniprot Q700E3

Descriptions

  • Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  • Computational description basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G57150.1); Has 2195 Blast hits to 2191 proteins in 139 species: Archae - 0; Bacteria - 2; Metazoa - 52; Fungi - 0; Plants - 2128; Viruses - 9; Other Eukaryotes - 4 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009867
ISO
PLAZA Integrative Orthologyjasmonic acid mediated signaling pathway Os04g0301500
GO:0048831
ISO
PLAZA Integrative Orthologyregulation of shoot system development Os04g0301500
GO:0055062
ISO
PLAZA Integrative Orthologyphosphate ion homeostasis Os04g0301500
GO:0080040
ISO
PLAZA Integrative Orthologypositive regulation of cellular response to phosphate starvation Os04g0301500
GO:0006355
ISS, IBA
TAS
Gene Ontologyregulation of transcription, DNA-templated1 2 3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Os04g0301500
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity Os04g0301500
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0043565
IBA
Gene Ontologysequence-specific DNA binding3
GO:0003700
ISS, IBA
Gene OntologyDNA-binding transcription factor activity1 3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus3
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Os04g0301500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 Helix-loop-helix DNA-binding domain superfamily
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)