Gene: AT4G29340
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G29340
- Transcript Identifier AT4G29340.1
- Gene Type Coding gene
- Location Chr4 : 14447718-14448467 : positive
Gene Family Information
- ID HOM05D000996
- #Genes/#Species 607/99
- Phylogenetic origin
- ID ORTHO05D000858
- #Genes/#Species 580/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G29340.1
- symbol PRF4
- uniprot Q38904
Descriptions
- Description profilin 4
- Computational description profilin 4 (PRF4); FUNCTIONS IN: actin binding; INVOLVED IN: cytoskeleton organization, actin cytoskeleton organization; LOCATED IN: nucleus, actin cytoskeleton, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Profilin/allergen (InterPro:IPR002097), Profilin, plant (InterPro:IPR005455); BEST Arabidopsis thaliana protein match is: profilin 5 (TAIR:AT2G19770.1); Has 899 Blast hits to 898 proteins in 239 species: Archae - 0; Bacteria - 2; Metazoa - 128; Fungi - 117; Plants - 583; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051259 | ISO | PLAZA Integrative Orthology | protein complex oligomerization | Zm00001eb293600 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | Zm00001eb371230 |
| GO:0007097 | ISO | PLAZA Integrative Orthology | nuclear migration | Zm00001eb353570 |
| GO:0009860 | ISO | PLAZA Integrative Orthology | pollen tube growth | Zm00001eb371230 |
| GO:0030845 | ISO | PLAZA Integrative Orthology | phospholipase C-inhibiting G protein-coupled receptor signaling pathway | Zm00001eb293600 |
| GO:0032956 | ISO | PLAZA Integrative Orthology | regulation of actin cytoskeleton organization | Zm00001eb353570 |
| GO:0042989 | IBA | Gene Ontology | sequestering of actin monomers | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003779 | IEA | GOA Database | actin binding | |
| GO:0003779 | IEA | InterPro | actin binding | |
| GO:0005546 | ISO | PLAZA Integrative Orthology | phosphatidylinositol-4,5-bisphosphate binding | Zm00001eb293600 |
| GO:0070064 | ISO | PLAZA Integrative Orthology | proline-rich region binding | Zm00001eb353570 |
| GO:0003785 | IBA | Gene Ontology | actin monomer binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | IDA ISM | Gene Ontology | cytoplasm | 2 |
| GO:0005634 | IDA | GOA Database | nucleus | |
| GO:0005634 | HDA | Gene Ontology | nucleus | 3 |
| GO:0005856 | IEA | GOA Database | cytoskeleton | |
| GO:0005938 | IBA | Gene Ontology | cell cortex | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 20.2.2.3 | Cytoskeleton organisation.microfilament network.actin polymerisation.profilin actin nucleation protein |