Gene: AT4G29330

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G29330
  • Transcript Identifier AT4G29330.1
  • Gene Type Coding gene
  • Location Chr4 : 14444937-14446952 : positive

Gene Family Information

  • ID HOM05D001731
  • #Genes/#Species 374/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G29330.1
  • symbol DER1
  • uniprot Q8VZU9

Descriptions

  • Description DERLIN-1
  • Computational description DERLIN-1 (DER1); CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana protein match is: DERLIN-2.2 (TAIR:AT4G04860.1); Has 918 Blast hits to 916 proteins in 241 species: Archae - 0; Bacteria - 22; Metazoa - 340; Fungi - 200; Plants - 147; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030968
IBA
Gene Ontologyendoplasmic reticulum unfolded protein response1
GO:0030433
IBA
Gene Ontologyubiquitin-dependent ERAD pathway1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051787
IBA
Gene Ontologymisfolded protein binding1
GO:1990381
IBA
Gene Ontologyubiquitin-specific protease binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005886
HDA
Gene Ontologyplasma membrane2
GO:0000839
IBA
Gene OntologyHrd1p ubiquitin ligase ERAD-L complex1
GO:0030176
IBA
Gene Ontologyintegral component of endoplasmic reticulum membrane1
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005783
IEA
GOA Databaseendoplasmic reticulum

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035952 Rhomboid-like superfamily
IPR007599 Derlin
Mapman id Description
19.2.4.2.2.2 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).substrate extraction.membrane protein retrotranslocase (DFM1)