Gene: AT4G28820
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G28820
- Transcript Identifier AT4G28820.3
- Gene Type Coding gene
- Location Chr4 : 14230360-14232287 : negative
Gene Family Information
- ID HOM05D006778
- #Genes/#Species 119/88
- Phylogenetic origin
- ID ORTHO05D008341
- #Genes/#Species 120/88
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G28820.3
- uniprot Q67Y48
Descriptions
- Description HIT-type Zinc finger family protein
- Computational description HIT-type Zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529); Has 375 Blast hits to 372 proteins in 152 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi - 117; Plants - 47; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000463 | IBA | Gene Ontology | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1 |
| GO:0000492 | IBA | Gene Ontology | box C/D snoRNP assembly | 1 |
| GO:0048254 | IBA | Gene Ontology | snoRNA localization | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM, IBA | Gene Ontology | nucleus | 1 |
| GO:0070761 | IBA | Gene Ontology | pre-snoRNP complex | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |