Gene: AT4G24970

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G24970
  • Transcript Identifier AT4G24970.1
  • Gene Type Coding gene
  • Location Chr4 : 12831125-12835449 : positive

Gene Family Information

  • ID HOM05D000902
  • #Genes/#Species 663/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G24970.1
  • uniprot F4JRS4

Descriptions

  • Description Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
  • Computational description Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT5G50780.1); Has 769 Blast hits to 718 proteins in 131 species: Archae - 4; Bacteria - 82; Metazoa - 313; Fungi - 18; Plants - 223; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016310
IEA
GOA Databasephosphorylation
GO:0031047
IEA
GOA Databasegene silencing by RNA
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006952
IEA
GOA Databasedefense response
GO:0006325
IEA
GOA Databasechromatin organization
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:1902290
IMP
Gene Ontologypositive regulation of defense response to oomycetes1
GO:0044030
IMP
Gene Ontologyregulation of DNA methylation1
GO:0031935
ISS
Gene Ontologyregulation of chromatin silencing
GO:0006282
ISS
Gene Ontologyregulation of DNA repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016301
IEA
GOA Databasekinase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0004519
ISS
Gene Ontologyendonuclease activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
ISS
Gene OntologyDNA binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
ISS
Gene OntologyRNA binding
GO:0043621
IDA, IPI
Gene Ontologyprotein self-association1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISS, ISM
Gene Ontologynucleus
GO:0016604
IDA
Gene Ontologynuclear body1
GO:0010369
IDA
Gene Ontologychromocenter1
GO:0005654
IDA
Gene Ontologynucleoplasm1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036890 Histidine kinase/HSP90-like ATPase superfamily
IPR041006 Morc, S5 domain 2-like
Mapman id Description
12.5.1.2 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.auxiliary factor (MORC)