Gene: AT4G24540
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G24540
- Transcript Identifier AT4G24540.1
- Gene Type Coding gene
- Location Chr4 : 12671160-12673645 : negative
Gene Family Information
- ID HOM05D000042
- #Genes/#Species 4894/100
- Phylogenetic origin
- ID ORTHO05D001427
- #Genes/#Species 409/91
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G24540.1
- symbol AGL24
- uniprot O82794
Descriptions
- Description AGAMOUS-like 24
- Computational description AGAMOUS-like 24 (AGL24); FUNCTIONS IN: sequence-specific DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: floral whorl development, maintenance of floral meristem identity, maintenance of inflorescence meristem identity, floral meristem determinacy, regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT2G22540.1); Has 7220 Blast hits to 7219 proteins in 914 species: Archae - 3; Bacteria - 10; Metazoa - 648; Fungi - 309; Plants - 6171; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009908 | IEA | GOA Database | flower development | |
GO:0030154 | IEA | GOA Database | cell differentiation | |
GO:0006357 | IBA | Gene Ontology | regulation of transcription by RNA polymerase II | 1 |
GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
GO:0045944 | IEA | Gene Ontology | positive regulation of transcription by RNA polymerase II | |
GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II | |
GO:0010220 | IEP | Gene Ontology | positive regulation of vernalization response | 2 |
GO:0048510 | IMP | Gene Ontology | regulation of timing of transition from vegetative to reproductive phase | 2 |
GO:0010077 | IMP, IGI | Gene Ontology | maintenance of inflorescence meristem identity | 3 4 |
GO:0048438 | IGI | Gene Ontology | floral whorl development | 5 |
GO:0009739 | IEP | Gene Ontology | response to gibberellin | 6 |
GO:0045893 | IEP | Gene Ontology | positive regulation of transcription, DNA-templated | 6 |
GO:0010076 | IGI | Gene Ontology | maintenance of floral meristem identity | 7 |
GO:0010582 | IGI | Gene Ontology | floral meristem determinacy | 7 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000977 | IEA | GOA Database | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
GO:0000978 | IBA | Gene Ontology | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 1 |
GO:0000981 | IBA | Gene Ontology | DNA-binding transcription factor activity, RNA polymerase II-specific | 1 |
GO:0003677 | IEA | GOA Database | DNA binding | |
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0046983 | IEA | GOA Database | protein dimerization activity | |
GO:0046983 | IEA | InterPro | protein dimerization activity | |
GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 8 |
GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
GO:0042803 | IPI | Gene Ontology | protein homodimerization activity | 5 |
GO:0005515 | IPI | Gene Ontology | protein binding | 9 |
GO:0046982 | IPI | Gene Ontology | protein heterodimerization activity | 5 |
GO:0043565 | IPI | Gene Ontology | sequence-specific DNA binding | 6 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005737 | IEA | GOA Database | cytoplasm | |
GO:0005737 | IDA | Gene Ontology | cytoplasm | 10 |
GO:0005634 | IEA | GOA Database | nucleus | |
GO:0005634 | IDA ISM | Gene Ontology | nucleus | 10 |
GO:0005634 | IEA | InterPro | nucleus |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |