Gene: AT4G24290

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G24290
  • Transcript Identifier AT4G24290.2
  • Gene Type Coding gene
  • Location Chr4 : 12594856-12597815 : positive

Gene Family Information

  • ID HOM05D000619
  • #Genes/#Species 922/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G24290.2
  • uniprot Q9STW5

Descriptions

  • Description MAC/Perforin domain-containing protein
  • Computational description MAC/Perforin domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864), Membrane attack complex component/perforin (MACPF) domain, metazoa (InterPro:IPR020865); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT1G28380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Computational description MAC/Perforin domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864), Membrane attack complex component/perforin (MACPF) domain, metazoa (InterPro:IPR020865); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT1G28380.1); Has 264 Blast hits to 263 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 51; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2000031
IEA
Gene Ontologyregulation of salicylic acid mediated signaling pathway
GO:2000031
IEA
InterProregulation of salicylic acid mediated signaling pathway
GO:0009626
IEA
GOA Databaseplant-type hypersensitive response
GO:0009626
IBA
Gene Ontologyplant-type hypersensitive response1
GO:0006952
IEA
GOA Databasedefense response
GO:0006952
IEA
InterProdefense response
GO:0045087
IEA
GOA Databaseinnate immune response
GO:0002376
IEA
GOA Databaseimmune system process
GO:0012501
IEA
GOA Databaseprogrammed cell death
GO:0012501
IEA
InterProprogrammed cell death

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
IBA
Gene Ontologyplasma membrane1 2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020864 Membrane attack complex component/perforin (MACPF) domain
IPR044663 MACPF domain-containing protein CAD1/NSL1-like
Mapman id Description
35.1 not assigned.annotated