Gene: AT4G23950

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G23950
  • Transcript Identifier AT4G23950.2
  • Gene Type Coding gene
  • Location Chr4 : 12442297-12444330 : positive

Gene Family Information

  • ID HOM05D002356
  • #Genes/#Species 288/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G23950.2
  • Alias AtSUN5,SUN5,SUN-domain protein 5
  • uniprot F4JPE9

Descriptions

  • Description Galactose-binding protein
  • Computational description Galactose-binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sad1/UNC-like, C-terminal (InterPro:IPR012919), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Galactose-binding protein (TAIR:AT1G22882.1); Has 867 Blast hits to 815 proteins in 241 species: Archae - 25; Bacteria - 79; Metazoa - 272; Fungi - 148; Plants - 95; Viruses - 1; Other Eukaryotes - 247 (source: NCBI BLink).
  • Computational description Galactose-binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sad1/UNC-like, C-terminal (InterPro:IPR012919), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Galactose-binding protein (TAIR:AT1G22882.1).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006997
IGI
Gene Ontologynucleus organization1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0043621
IPI
Gene Ontologyprotein self-association1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046658
HDA
Gene Ontologyanchored component of plasma membrane2
GO:0005737
IBA
Gene Ontologycytoplasm3
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IBA
Gene Ontologymembrane3
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012919 SUN domain
IPR045120 SUN domain-containing Suco/Slp1-like
IPR008979 Galactose-binding-like domain superfamily
Mapman id Description
20.4.3.4 Cytoskeleton organisation.nuclear dynamics.nuclear shape determination.regulatory factor (SUN3/4/5)