Gene: AT4G23810
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G23810
- Transcript Identifier AT4G23810.1
- Gene Type Coding gene
- Location Chr4 : 12392666-12393739 : negative
Gene Family Information
- ID HOM05D000405
- #Genes/#Species 1246/95
- Phylogenetic origin
- ID ORTHO05D000974
- #Genes/#Species 534/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G23810.1
- symbol WRKY53
- uniprot Q9SUP6
Descriptions
- Description WRKY family transcription factor
- Computational description WRKY53; FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G11070.1); Has 3150 Blast hits to 2715 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3139; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:2000022 | IMP | Gene Ontology | regulation of jasmonic acid mediated signaling pathway | 1 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Solyc01g095630.3 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0006952 | IEA | GOA Database | defense response | |
| GO:0010200 | IEP | GOA Database | response to chitin | |
| GO:0009617 | IEP | Gene Ontology | response to bacterium | 1 |
| GO:0042542 | IEP | Gene Ontology | response to hydrogen peroxide | 2 |
| GO:0010193 | IEP | Gene Ontology | response to ozone | 2 |
| GO:0009751 | IEP | Gene Ontology | response to salicylic acid | 2 |
| GO:0010150 | IMP | Gene Ontology | leaf senescence | 3 |
| GO:0042742 | IMP | Gene Ontology | defense response to bacterium | 4 |
| GO:0031347 | IMP | Gene Ontology | regulation of defense response | 5 |
| GO:0045893 | IDA | Gene Ontology | positive regulation of transcription, DNA-templated | 6 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043565 | IEA | GOA Database | sequence-specific DNA binding | |
| GO:0043565 | IEA | InterPro | sequence-specific DNA binding | |
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | IMP ISS, IBA | Gene Ontology | DNA-binding transcription factor activity | 5 7 |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IDA | Gene Ontology | DNA binding | 6 |
| GO:0000976 | IBA | Gene Ontology | transcription cis-regulatory region binding | 7 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 8 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | IDA | GOA Database | chloroplast | |
| GO:0009507 | HDA | Gene Ontology | chloroplast | 9 |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM, IBA | Gene Ontology | nucleus | 7 10 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.22.1 | RNA biosynthesis.transcriptional regulation.WRKY transcription factor activity.transcription factor (WRKY) |