Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G11070 WRKY family transcription factor member of WRKY Transcription Factor%3B Group III WRKY41%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%2C regulation of transcription%3B CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657)%3B BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr4 + View
AT2G46400 WRKY DNA-binding protein 46 member of WRKY Transcription Factor%3B Group III WRKY DNA-binding protein 46 (WRKY46)%3B CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657)%3B BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1)%3B Has 3385 Blast hits to 2951 proteins in 185 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 3370%3B Viruses - 0%3B Other Eukaryotes - 15 (source: NCBI BLink). Chr2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G11110 LG-9 - View
Aethionema arabicum Aa31LG6G7030 LG-6 - View
Aethionema arabicum Aa31LG1G27740 LG-1 - View
Acer truncatum Atru.chr9.2017 chr9 + View
Acer truncatum Atru.chr5.640 chr5 - View
Actinidia chinensis Actinidia27328 Lachesis_group14 - View
Actinidia chinensis Actinidia10111 Lachesis_group0 + View
Actinidia chinensis Actinidia22725 Lachesis_group20 - View
Arabidopsis lyrata AL5G44150 scaffold_5 - View
Arabidopsis lyrata AL6G45210 scaffold_6 + View
Arabidopsis lyrata AL7G29540 scaffold_7 + View
Arabidopsis lyrata AL4G45700 scaffold_4 - View
Avicennia marina MSTRG.17329 ScioBoG_19743_HRSCAF_19834 - View
Avicennia marina MSTRG.20892 ScioBoG_26180_HRSCAF_26306 - View
Amaranthus hybridus Ah.12g052390 Probable WRKY transcription factor 41 (WRKY DNA-binding protein 41) AmaHy_arrow1_Scaffold_12 - View
Aquilegia oxysepala Aqoxy7G00140 CHR07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WH6N3S PF03106 - WRKY DNA -binding domain (WRKY) arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KK3V44 PF03106 - WRKY DNA -binding domain (WRKY) arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZTD7SX PF03106 - WRKY DNA -binding domain (WRKY) arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.50ZMU5 PF03106 - WRKY DNA -binding domain (WRKY) arahy.Tifrunner.gnm1.Arahy.05 + View
Brassica carinata BcaB05g23864 ChrB05 - View
Brassica carinata BcaNung03196 Contig1080 - View
Brassica carinata BcaC09g50946 ChrC09 + View
Brassica carinata BcaC03g16374 ChrC03 - View
Brassica carinata BcaNung01087 Contig456 - View
Brassica napus C07p53130 C07 - View
Brassica napus A01p15120 A01 - View
Brassica napus C04p01550 C04 + View
Brassica napus A02p26390 A02 - View
Brassica napus C01p19020 C01 - View
Brassica napus A03p54770 A03 - View
Brassica napus C02p41930 C02 - View
Brassica oleracea BolC7t45809H C7 - View
Brassica oleracea BolC1t01828H C1 - View
Brassica oleracea BolC2t10226H C2 - View
Brassica rapa BraA02t07641Z A02 - View
Brassica rapa BraA01t01450Z A01 - View
Brassica rapa BraA03t14544Z A03 - View
Beta vulgaris EL10Ac5g12898 PF03106 - WRKY DNA -binding domain (WRKY) Chr5_EL10_PGA_scaffold2 - View
Capsicum annuum CAN.G986.31 PGAv.1.6.scaffold986 + View
Capsicum annuum CAN.G532.103 PGAv.1.6.scaffold532 - View
Capsicum annuum CAN.G792.42 PGAv.1.6.scaffold792 + View
Cicer arietinum L. Ca_17488_v3 Ca_LG6_v3 + View
Corylus avellana Haze_00098 Similar to WRKY41: Probable WRKY transcription factor 41 (Arabidopsis thaliana OX%3D3702) 1 + View
Corylus avellana Haze_08635 Similar to WRKY41: Probable WRKY transcription factor 41 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc08_g15910 Putative Probable WRKY transcription factor 41 chr8 - View
Coffea canephora Cc02_g39120 Putative WRKY transcription factor 30 chr2 - View
Coffea canephora Cc02_g01860 Putative Probable WRKY transcription factor 41 chr2 + View
Citrus clementina Ciclev10005165m.g scaffold_9 - View
Citrus clementina Ciclev10021038m.g scaffold_3 + View
Citrus clementina Ciclev10020744m.g scaffold_3 + View
Ceratophyllum demersum CDE03G0123 12 + View
Ceratophyllum demersum CDE04G2045 2 - View
Carpinus fangiana Cfa016363 Cfa06 - View
Carpinus fangiana Cfa003824 Cfa01 + View
Cardamine hirsuta CARHR255530 WRKY family transcription factor Chr8 - View
Cardamine hirsuta CARHR231200 WRKY family transcription factor Chr7 - View
Carya illinoinensis CiPaw.06G007700 PF03106 - WRKY DNA -binding domain (WRKY) Chr06 - View
Carya illinoinensis CiPaw.05G257700 PF03106 - WRKY DNA -binding domain (WRKY) Chr05 + View
Carya illinoinensis CiPaw.12G084300 PF03106 - WRKY DNA -binding domain (WRKY) Chr12 + View
Carya illinoinensis CiPaw.01G073900 PF03106 - WRKY DNA -binding domain (WRKY) Chr01 - View
Carya illinoinensis CiPaw.11G123000 PF03106 - WRKY DNA -binding domain (WRKY) Chr11 + View
Citrullus lanatus ClCG05G000940 WRKY transcription factor 12 CG_Chr05 + View
Citrullus lanatus ClCG07G014950 WRKY family transcription factor CG_Chr07 - View
Cucumis melo MELO3C006037.2 WRKY transcription factor chr06 + View
Chenopodium quinoa AUR62010821 WRKY41: Probable WRKY transcription factor 41 C_Quinoa_Scaffold_1280 - View
Chenopodium quinoa AUR62004466 WRKY41: Probable WRKY transcription factor 41 C_Quinoa_Scaffold_4250 - View
Chenopodium quinoa AUR62023484 WRKY41: Probable WRKY transcription factor 41 C_Quinoa_Scaffold_1606 + View
Chenopodium quinoa AUR62019820 WRKY41: Probable WRKY transcription factor 41 C_Quinoa_Scaffold_1480 - View
Capsella rubella Carub.0005s2839 PF03106 - WRKY DNA -binding domain (WRKY) scaffold_5 - View
Capsella rubella Carub.0007s1731 PF03106 - WRKY DNA -binding domain (WRKY) scaffold_7 + View
Capsella rubella Carub.0006s2984 PF03106 - WRKY DNA -binding domain (WRKY) scaffold_6 + View
Capsella rubella Carub.0004s2910 PF03106 - WRKY DNA -binding domain (WRKY) scaffold_4 - View
Cucumis sativus L. CsaV3_4G006480 WRKY transcription factor chr4 - View
Daucus carota DCAR_005034 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_010624 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_027713 hypothetical protein DCARv2_Chr8 - View
Davidia involucrata Dinv38848 GWHABJS00000003 + View
Davidia involucrata Dinv35308 GWHABJS00000009 + View
Davidia involucrata Dinv28335 GWHABJS00000004 + View
Davidia involucrata Dinv32564 GWHABJS00000020 - View
Durio zibethinus Duzib205G1639 NW_019168381.1 - View
Durio zibethinus Duzib068G0298 NW_019167838.1 - View
Durio zibethinus Duzib133G0492 NW_019167938.1 - View
Durio zibethinus Duzib084G0273 NW_019167827.1 - View
Durio zibethinus Duzib138G1887 NW_019167893.1 - View
Durio zibethinus Duzib205G1628 NW_019168381.1 - View
Durio zibethinus Duzib068G0553 NW_019167838.1 + View
Erigeron canadensis ECA233G5489 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA233G0002 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.D02359 Chr04 - View
Eucalyptus grandis Eucgr.E00850 Chr05 - View
Erythranthe guttata Migut.B01847 scaffold_2 - View
Erythranthe guttata Migut.A00671 scaffold_1 + View
Erythranthe guttata Migut.E01246 scaffold_5 - View
Eutrema salsugineum Thhalv10025724m.g PF03106 - WRKY DNA -binding domain (WRKY) scaffold_1 + View
Eutrema salsugineum Thhalv10028794m.g PF03106 - WRKY DNA -binding domain (WRKY) scaffold_3 - View
Fragaria x ananassa FAN10G1047 PF03106 - WRKY DNA -binding domain (WRKY) Fvb7-1 - View
Fragaria x ananassa FAN10G0817 PF03106 - WRKY DNA -binding domain (WRKY) Fvb7-1 - View
Fragaria x ananassa FAN18G1211 PF03106 - WRKY DNA -binding domain (WRKY) Fvb5-1 + View
Fragaria x ananassa FAN08G3675 PF03106 - WRKY DNA -binding domain (WRKY) Fvb5-3 + View
Fragaria x ananassa FAN01G0996 PF03106 - WRKY DNA -binding domain (WRKY) Fvb7-4 + View
Fragaria x ananassa FAN13G3263 PF03106 - WRKY DNA -binding domain (WRKY) Fvb5-2 - View
Fragaria vesca FvH4_5g04370 PF03106 - WRKY DNA -binding domain (WRKY) Fvb5 - View
Gossypium hirsutum Gohir.A08G100100 PF03106 - WRKY DNA -binding domain (WRKY) A08 - View
Gossypium hirsutum Gohir.A11G096100 PF03106 - WRKY DNA -binding domain (WRKY) A11 - View
Gossypium hirsutum Gohir.D12G236600 PF03106 - WRKY DNA -binding domain (WRKY) D12 - View
Gossypium hirsutum Gohir.D11G100800 PF03106 - WRKY DNA -binding domain (WRKY) D11 - View
Gossypium hirsutum Gohir.A12G235400 PF03106 - WRKY DNA -binding domain (WRKY) A12 - View
Gossypium hirsutum Gohir.D07G143900 PF03106 - WRKY DNA -binding domain (WRKY) D07 + View
Gossypium hirsutum Gohir.D08G131700 PF03106 - WRKY DNA -binding domain (WRKY) D08 + View
Gossypium hirsutum Gohir.A07G138800 PF03106 - WRKY DNA -binding domain (WRKY) A07 + View
Glycine max Glyma.08G021900 PF03106 - WRKY DNA -binding domain (WRKY) Gm08 - View
Glycine max Glyma.05G215900 PF03106 - WRKY DNA -binding domain (WRKY) Gm05 - View
Glycine max Glyma.01G224800 PF03106 - WRKY DNA -binding domain (WRKY) Gm01 - View
Gossypium raimondii Gorai.001G155800 Chr01 + View
Gossypium raimondii Gorai.008G270600 Chr08 + View
Gossypium raimondii Gorai.004G134600 Chr04 + View
Gossypium raimondii Gorai.008G253300 Chr08 - View
Gossypium raimondii Gorai.007G107300 Chr07 - View
Helianthus annuus HanXRQChr06g0166901 Probable WRKY DNA-binding protein 46 HanXRQChr06 - View
Hydrangea macrophylla Hma1.2p1_0359F.1_g135330 Hma1.2p1_0359F.1 + View
Lupinus albus Lalb_Chr05g0224181 PF03106 - WRKY DNA -binding domain (WRKY) Lalb_Chr05 + View
Lupinus albus Lalb_Chr23g0271461 PF03106 - WRKY DNA -binding domain (WRKY) Lalb_Chr23 - View
Lotus japonicus Lj4g0016553 PF03106 - WRKY DNA -binding domain (WRKY) chr4 + View
Lotus japonicus Lj1g0005270 PF03106 - WRKY DNA -binding domain (WRKY) chr1 + View
Lotus japonicus LjContig00312_ERROPOS870357g0026266 PF03106 - WRKY DNA -binding domain (WRKY) Contig00312_ERROPOS870357 + View
Lonicera japonica Lj9C590T16 GWHAAZE00000009 + View
Lonicera japonica Lj2A170T35 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_8_6060 PF03106 - WRKY DNA -binding domain (WRKY) Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_6_84341 PF03106 - WRKY DNA -binding domain (WRKY) Lsat_1_v8_lg_6 + View
Lactuca sativa Lsat_1_v5_gn_6_12141 Lsat_1_v8_lg_6 - View
Malus domestica MD06G1104100 WRKY family transcription factor Chr06 - View
Malus domestica MD14G1123000 WRKY family transcription factor Chr14 - View
Malus domestica MD07G1285200 WRKY family transcription factor Chr07 - View
Malus domestica MD01G1215300 WRKY family transcription factor Chr01 - View
Manihot esculenta Manes.14G018602 Chromosome14 + View
Manihot esculenta Manes.02G011500 Chromosome02 + View
Medicago truncatula Medtr8g099350 WRKY family transcription factor chr8 - View
Nicotiana tabacum Nitab4.5_0000223g0340 DNA-binding WRKY Nitab4.5_0000223 - View
Olea europaea Oeu038576.2 chr11 - View
Petunia axillaris Peaxi162Scf00074g01135 Unknown protein Peaxi162Scf00074 + View
Petunia axillaris Peaxi162Scf00102g01741 WRKY family transcription factor Peaxi162Scf00102 - View
Punica granatum PGR042G2596 NC_045130.1 + View
Punica granatum PGR031G0485 NC_045127.1 + View
Prunus persica Prupe.2G185100 PF03106 - WRKY DNA -binding domain (WRKY) Pp02 - View
Prunus persica Prupe.2G307400 PF03106 - WRKY DNA -binding domain (WRKY) Pp02 - View
Prunus persica Prupe.5G117000 PF03106 - WRKY DNA -binding domain (WRKY) Pp05 - View
Populus trichocarpa Potri.001G092900 PF03106 - WRKY DNA -binding domain (WRKY) Chr01 + View
Populus trichocarpa Potri.003G138600 PF03106 - WRKY DNA -binding domain (WRKY) Chr03 - View
Populus trichocarpa Potri.002G168700 PF03106 - WRKY DNA -binding domain (WRKY) Chr02 - View
Phaseolus vulgaris Phvul.002G163400 PF03106 - WRKY DNA -binding domain (WRKY) Chr02 - View
Phaseolus vulgaris Phvul.002G297100 PF03106 - WRKY DNA -binding domain (WRKY) Chr02 - View
Quercus lobata QL02p031046 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr7g0195191 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim07G0083100 chr07 + View
Rhododendron simsii Rhsim03G0198800 chr03 - View
Rhododendron simsii Rhsim07G0005900 chr07 + View
Striga asiatica SGA_v2.0_scaffold111G31418 scaffold111 + View
Striga asiatica SGA_v2.0_scaffold96G28975 scaffold96 + View
Salvia bowleyana SalBow4G1065 GWHASIU00000008 + View
Salix brachista Sabra03G0099800 GWHAAZH00000003 - View
Salix brachista Sabra01G0069300 GWHAAZH00000001 + View
Salix brachista Sabra14G0070600 GWHAAZH00000014 - View
Salix brachista Sabra02G0143200 GWHAAZH00000002 + View
Simmondsia chinensis Sc01g0010200 GWHAASQ00000001 - View
Simmondsia chinensis Sc07g0009980 GWHAASQ00000007 - View
Simmondsia chinensis Sc01g0002870 GWHAASQ00000001 + View
Sechium edule Sed0020692 LG07 + View
Sechium edule Sed0014722 LG13 + View
Solanum lycopersicum Solyc01g095630.3 WRKY transcription factor 41 SL4.0ch01 - View
Solanum lycopersicum Solyc08g008280.3 WRKY transcription factor 53 SL4.0ch08 - View
Solanum lycopersicum Solyc08g082110.4 WRKY transcription factor 54 SL4.0ch08 - View
Schrenkiella parvula Sp7g21770 PF03106 - WRKY DNA -binding domain (WRKY) ch7-4 - View
Schrenkiella parvula Sp6g06380 PF03106 - WRKY DNA -binding domain (WRKY) ch6-1 - View
Schrenkiella parvula Sp5g01730 PF03106 - WRKY DNA -binding domain (WRKY) ch5-1 + View
Solanum pennellii Sopen08g004130 member of WRKY Transcription Factor | Group III | WRKY53 | FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 6 processes | LOCATED IN: nucleus, chloroplast | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: DNA-binding WRKY | BEST Arabidopsis thaliana protein match is: WRKY family transcription factor Spenn-ch08 - View
Solanum pennellii Sopen01g039380 member of WRKY Transcription Factor | Group III | WRKY41 | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription | CONTAINS InterPro DOMAIN/s: DNA-binding WRKY | BEST Arabidopsis thaliana protein match is: WRKY family transcription factor Spenn-ch01 - View
Solanum pennellii Sopen08g030400 member of WRKY Transcription Factor | Group III | WRKY53 | FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 6 processes | LOCATED IN: nucleus, chloroplast | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: DNA-binding WRKY | BEST Arabidopsis thaliana protein match is: WRKY family transcription factor Spenn-ch08 - View
Solanum pennellii Sopen03g003340 member of WRKY Transcription Factor | Group III | WRKY41 | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription | CONTAINS InterPro DOMAIN/s: DNA-binding WRKY | BEST Arabidopsis thaliana protein match is: WRKY family transcription factor Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400005835 WRKY transcription factor-30 ST4.03ch08 - View
Solanum tuberosum PGSC0003DMG400000211 WRKY transcription factor ST4.03ch01 - View
Solanum tuberosum PGSC0003DMG400012160 WRKY transcription factor-30 ST4.03ch08 - View
Solanum tuberosum PGSC0003DMG400009103 WRKY transcription factor ST4.03ch03 - View
Selenicereus undatus Hund14231 Scaffold_33677 + View
Selenicereus undatus Hund27216 Scaffold_2055 + View
Selenicereus undatus Hund11399 Scaffold_10417 + View
Trochodendron aralioides TAR375G0420 group15 - View
Trochodendron aralioides TAR636G1663 group1 + View
Trochodendron aralioides TAR629G3330 group0 - View
Theobroma cacao Thecc.03G294800 WRKY family transcription factor Chromosome_3 - View
Tarenaya hassleriana THA.LOC104813038 probable WRKY transcription factor 53 isoform X1 NW_010965372.1 - View
Tarenaya hassleriana THA.LOC104806433 probable WRKY transcription factor 41 NW_010962392.1 - View
Tarenaya hassleriana THA.LOC104803065 probable WRKY transcription factor 46 NW_010970490.1 - View
Trifolium pratense TPR.G4772 Tp57577_TGAC_v2_LG6 + View
Trifolium pratense TPR.G3440 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI14G1167 NC_052249.1 + View
Tripterygium wilfordii TWI23G0012 NC_052239.1 - View
Tripterygium wilfordii TWI60G1285 NC_052246.1 - View
Vaccinium macrocarpon vmacro06575 Similar to WRKY53: Probable WRKY transcription factor 53 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro13904 Similar to WRKY41: Probable WRKY transcription factor 41 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G0118 CM024069.1 - View
Vigna mungo VMungo1215G2286 CM024074.1 + View
Vitis vinifera GSVIVG01027069001 chr15 + View
Vitis vinifera GSVIVG01019511001 chr2 - View