Gene: AT4G21900

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G21900
  • Transcript Identifier AT4G21900.1
  • Gene Type Coding gene
  • Location Chr4 : 11616567-11619349 : negative

Gene Family Information

  • ID HOM05D001691
  • #Genes/#Species 383/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G21900.1
  • symbol PRORP3
  • uniprot F4JKB6

Descriptions

  • Description proteinaceous RNase P 3
  • Computational description proteinaceous RNase P 3 (PRORP3); FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: nucleus, membrane; CONTAINS InterPro DOMAIN/s: Ribonuclease Zc3h12a-like (InterPro:IPR021869), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: proteinaceous RNase P 2 (TAIR:AT2G16650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090501
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis
GO:0008033
IEA
GOA DatabasetRNA processing
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0001682
IDA
IBA
Gene OntologytRNA 5'-leader removal1 2
GO:0043144
IMP
Gene Ontologysno(s)RNA processing2
GO:0006397
IMP
Gene OntologymRNA processing2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004518
IEA
GOA Databasenuclease activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0004526
IEA
GOA Databaseribonuclease P activity
GO:0004526
IDA
IBA
Gene Ontologyribonuclease P activity1 2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
Gene Ontologynucleus3
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031595 Protein-only RNase P, C-terminal
IPR033443 Pentacotripeptide-repeat region of PRORP
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
16.6.2 RNA processing.ribonuclease activities.protein-only ribonuclease (RNase P)