Gene: AT4G20320
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G20320
- Transcript Identifier AT4G20320.2
- Gene Type Coding gene
- Location Chr4 : 10974980-10978998 : positive
Gene Family Information
- ID HOM05D000936
- #Genes/#Species 645/100
- Phylogenetic origin
- ID ORTHO05D001411
- #Genes/#Species 412/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G20320.2
- uniprot Q0WRY1
Descriptions
- Description CTP synthase family protein
- Computational description CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT1G30820.1); Has 10893 Blast hits to 10859 proteins in 2946 species: Archae - 237; Bacteria - 5540; Metazoa - 255; Fungi - 235; Plants - 169; Viruses - 0; Other Eukaryotes - 4457 (source: NCBI BLink).
- Computational description CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine nucleotide biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT1G30820.1); Has 10893 Blast hits to 10859 proteins in 2946 species: Archae - 237; Bacteria - 5540; Metazoa - 255; Fungi - 235; Plants - 169; Viruses - 0; Other Eukaryotes - 4457 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006541 | IEA | GOA Database | glutamine metabolic process | |
| GO:0006241 | IEA | GOA Database | CTP biosynthetic process | |
| GO:0006241 | IBA | Gene Ontology | CTP biosynthetic process | 1 |
| GO:0006241 | IEA | InterPro | CTP biosynthetic process | |
| GO:0006221 | IEA | GOA Database | pyrimidine nucleotide biosynthetic process | |
| GO:0006221 | IEA | InterPro | pyrimidine nucleotide biosynthetic process | |
| GO:0019856 | IBA | Gene Ontology | pyrimidine nucleobase biosynthetic process | 1 |
| GO:0044210 | IEA | Gene Ontology | 'de novo' CTP biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003883 | IBA IEA | Gene Ontology | CTP synthase activity | 1 |
| GO:0003883 | IEA | InterPro | CTP synthase activity | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0016874 | IEA | GOA Database | ligase activity | |
| GO:0042802 | IBA | Gene Ontology | identical protein binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0097268 | IDA | Gene Ontology | cytoophidium | 2 |
| GO:0005829 | IDA | Gene Ontology | cytosol | 2 |
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 6.2.1.6 | Nucleotide metabolism.pyrimidines.de novo biosynthesis.CTP synthetase |