Gene: AT4G20280

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G20280
  • Transcript Identifier AT4G20280.1
  • Gene Type Coding gene
  • Location Chr4 : 10953792-10954664 : positive

Gene Family Information

  • ID HOM05D004341
  • #Genes/#Species 164/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G20280.1
  • symbol TAF11
  • uniprot Q9M565

Descriptions

  • Description TBP-associated factor 11
  • Computational description TBP-associated factor 11 (TAF11); FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity, DNA binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TAFII28-like protein (InterPro:IPR006809), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: TBP-associated factor 11B (TAIR:AT1G20000.1); Has 444 Blast hits to 437 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 211; Fungi - 119; Plants - 66; Viruses - 2; Other Eukaryotes - 46 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051123
IEA
GOA DatabaseRNA polymerase II preinitiation complex assembly
GO:0051123
IBA
Gene OntologyRNA polymerase II preinitiation complex assembly1
GO:0051123
IEA
InterProRNA polymerase II preinitiation complex assembly
GO:0006367
IEA
GOA Databasetranscription initiation from RNA polymerase II promoter
GO:0006367
IEA
InterProtranscription initiation from RNA polymerase II promoter
GO:0045893
IEA
GOA Databasepositive regulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046982
IEA
Gene Ontologyprotein heterodimerization activity
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0008134
IBA
Gene Ontologytranscription factor binding1
GO:0003713
IBA
Gene Ontologytranscription coactivator activity1
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005634
IEA
InterPronucleus
GO:0005669
IEA
GOA Databasetranscription factor TFIID complex
GO:0005669
IBA
Gene Ontologytranscription factor TFIID complex1
GO:0005669
IEA
InterProtranscription factor TFIID complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009072 Histone-fold
IPR045127 Transcription initiation factor TFIID subunit 11-like
IPR006809 TAFII28-like protein domain
Mapman id Description
15.3.4.2.7 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TFIId complex.component TAF11