Gene: AT4G18940

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G18940
  • Transcript Identifier AT4G18940.1
  • Gene Type Coding gene
  • Location Chr4 : 10372732-10373581 : positive

Gene Family Information

  • ID HOM05D003032
  • #Genes/#Species 227/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G18940.1
  • uniprot O49408

Descriptions

  • Description RNA ligase/cyclic nucleotide phosphodiesterase family protein
  • Computational description RNA ligase/cyclic nucleotide phosphodiesterase family protein; FUNCTIONS IN: cyclic-nucleotide phosphodiesterase activity, catalytic activity; INVOLVED IN: RNA metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: RNA ligase/cyclic nucleotide phosphodiesterase (InterPro:IPR009097), 2',3'-cyclic-nucleotide 3'-phosphodiesterase (InterPro:IPR012386); BEST Arabidopsis thaliana protein match is: RNA ligase/cyclic nucleotide phosphodiesterase family protein (TAIR:AT4G18930.1); Has 149 Blast hits to 149 proteins in 25 species: Archae - 3; Bacteria - 10; Metazoa - 0; Fungi - 2; Plants - 56; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009187
IBA
Gene Ontologycyclic nucleotide metabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004113
IBA
Gene Ontology2',3'-cyclic-nucleotide 3'-phosphodiesterase activity1
GO:0016874
IEA
GOA Databaseligase activity
GO:0004112
IEA
GOA Databasecyclic-nucleotide phosphodiesterase activity
GO:0004112
IEA
InterProcyclic-nucleotide phosphodiesterase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012386 2',3'-cyclic-nucleotide 3'-phosphodiesterase
IPR009097 Cyclic phosphodiesterase
Mapman id Description
35.1 not assigned.annotated