Gene: AT4G18870

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G18870
  • Transcript Identifier AT4G18870.1
  • Gene Type Coding gene
  • Location Chr4 : 10346169-10347227 : positive

Gene Family Information

  • ID HOM05D000123
  • #Genes/#Species 2785/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G18870.1
  • uniprot O49402

Descriptions

  • Description E2F/DP family winged-helix DNA-binding domain-containing protein
  • Computational description E2F/DP family winged-helix DNA-binding domain; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 2839 Blast hits to 1582 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 505; Fungi - 454; Plants - 1509; Viruses - 0; Other Eukaryotes - 371 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
ISS
Gene Ontologyregulation of transcription, DNA-templated1
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0034605
IBA
Gene Ontologycellular response to heat2
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS, IBA
Gene OntologyDNA-binding transcription factor activity1 2
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding2
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR036390 Winged helix DNA-binding domain superfamily
IPR000232 Heat shock factor (HSF)-type, DNA-binding
IPR027725 Heat shock transcription factor family
Mapman id Description
15.5.13 RNA biosynthesis.transcriptional regulation.transcription factor (HSF)