Gene: AT4G17890

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G17890
  • Transcript Identifier AT4G17890.1
  • Gene Type Coding gene
  • Location Chr4 : 9937121-9939146 : positive

Gene Family Information

  • ID HOM05D002571
  • #Genes/#Species 264/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G17890.1
  • symbol AGD8
  • uniprot Q8H100

Descriptions

  • Description ARF-GAP domain 8
  • Computational description ARF-GAP domain 8 (AGD8); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 9 (TAIR:AT5G46750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048205
IBA
Gene OntologyCOPI coating of Golgi vesicle1
GO:0050790
IEA
GOA Databaseregulation of catalytic activity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005096
IEA
GOA DatabaseGTPase activator activity
GO:0005096
IEA
InterProGTPase activator activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0000139
IEA
GOA DatabaseGolgi membrane
GO:0005829
IDA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038508 ArfGAP domain superfamily
IPR001164 Arf GTPase activating protein
IPR037278 ARFGAP/RecO-like zinc finger
Mapman id Description
22.3.2.3.2 Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase activation.class II ARF-GAP protein