Gene: AT4G17760

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G17760
  • Transcript Identifier AT4G17760.2
  • Gene Type Coding gene
  • Location Chr4 : 9872324-9873257 : positive

Gene Family Information

  • ID HOM05D006814
  • #Genes/#Species 118/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G17760.2
  • uniprot Q8L7G8

Descriptions

  • Description PCNA domain-containing protein
  • Computational description damaged DNA binding;exodeoxyribonuclease IIIs; FUNCTIONS IN: damaged DNA binding, exodeoxyribonuclease III activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Repair protein Rad1/Rec1 (InterPro:IPR003021); Has 245 Blast hits to 245 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
  • Computational description damaged DNA binding;exodeoxyribonuclease IIIs; FUNCTIONS IN: damaged DNA binding, exodeoxyribonuclease III activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Repair protein Rad1/Rec1 (InterPro:IPR003021); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000077
IBA
IEA
Gene OntologyDNA damage checkpoint signaling1
GO:0000077
IEA
InterProDNA damage checkpoint signaling
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IBA
Gene OntologyDNA repair1
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0030896
IBA
Gene Ontologycheckpoint clamp complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003021 Rad1/Rec1/Rad17
Mapman id Description
14.1.3.2.2 DNA damage response.DNA damage sensing and signalling.DNA damage checkpoint activation.9-1-1 DNA damage sensor complex.component RAD1-LIKE