Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 1.2e-103 379.8 186 100.0
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 3.9e-102 374.8 186 97.8
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 2.4e-99 365.5 186 95.7
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 1.2e-98 363.2 185 95.1
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 5.8e-98 360.9 184 95.7
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 5.8e-98 360.9 184 95.7
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 1.7e-97 359.4 184 95.1
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 2.9e-97 358.6 184 95.1
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 2.9e-97 358.6 184 95.1
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 2.9e-97 358.6 184 95.1
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 2.9e-97 358.6 186 94.1
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 6.4e-97 357.5 186 93.5
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 9.3e-96 353.6 186 89.8
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.5e-85 319.7 186 82.3
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 2.1e-84 315.8 185 80.0
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 9.0e-83 310.5 186 78.5
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 4.5e-82 308.1 187 78.1
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 7.6e-82 307.4 187 77.5
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 2.9e-81 305.4 187 78.1
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 4.9e-81 304.7 187 77.5
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 4.9e-81 304.7 184 78.3
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 6.4e-81 304.3 183 78.7
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 6.4e-81 304.3 187 77.0
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 6.4e-81 304.3 185 74.1
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 1.4e-80 303.1 187 77.0
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 2.4e-80 302.4 184 78.3
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 2.4e-80 302.4 181 76.2
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 2.4e-80 302.4 187 75.9
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 3.2e-80 302.0 187 75.9
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 5.5e-80 301.2 186 75.8
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 5.5e-80 301.2 186 77.4
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 7.1e-80 300.8 187 75.9
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 7.1e-80 300.8 187 75.9
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 7.1e-80 300.8 187 75.9
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 9.3e-80 300.4 183 77.0
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 1.6e-79 299.7 187 75.4
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 1.6e-79 299.7 183 74.3
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 1.6e-79 299.7 181 78.5
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 2.1e-79 299.3 187 75.4
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 2.7e-79 298.9 187 75.4
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 2.7e-79 298.9 184 76.6
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 3.5e-79 298.5 187 74.9
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 4.6e-79 298.1 187 75.4
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 4.6e-79 298.1 183 74.3
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 6.0e-79 297.7 187 74.3
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 6.0e-79 297.7 183 74.9
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 1.0e-78 297.0 184 75.5
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 1.0e-78 297.0 184 76.6
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 1.0e-78 297.0 188 73.4
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 1.3e-78 296.6 185 73.5
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 1.3e-78 296.6 184 75.5
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 1.3e-78 296.6 187 76.5
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 1.3e-78 296.6 183 73.8
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 1.8e-78 296.2 182 74.2
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 1.8e-78 296.2 187 74.9
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.1e-77 293.5 187 74.9
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 1.1e-77 293.5 187 73.3
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 2.5e-77 292.4 187 75.4
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 3.3e-77 292.0 184 75.5
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 3.3e-77 292.0 188 73.4
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 3.3e-77 292.0 184 73.9
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 4.3e-77 291.6 186 73.7
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 9.6e-77 290.4 183 75.4
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 9.6e-77 290.4 187 74.9
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 3.7e-76 288.5 187 73.8
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 6.2e-76 287.7 186 73.1
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 6.2e-76 287.7 187 74.3
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 8.2e-76 287.3 187 72.2
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 3.1e-75 285.4 204 68.6
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 4.0e-75 285.0 180 73.3
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 4.0e-75 285.0 187 72.2
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 3.4e-74 282.0 181 71.8
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 3.4e-74 282.0 187 71.7
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 5.8e-74 281.2 187 71.7
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 1.0e-73 280.4 183 73.2
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 1.7e-73 279.6 184 72.3
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 4.9e-73 278.1 183 72.7
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 8.4e-73 277.3 186 69.9
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 1.1e-72 276.9 188 69.7
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 1.4e-72 276.6 187 70.6
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 1.9e-72 276.2 187 70.6
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 3.2e-72 275.4 188 70.7
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 5.5e-72 274.6 189 69.8
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 2.1e-71 272.7 188 70.2
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 6.0e-71 271.2 235 59.1
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 3.0e-70 268.9 184 69.6
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 8.7e-70 267.3 187 68.4
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 3.3e-69 265.4 222 62.2
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 6.9e-67 257.7 184 65.8
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 2.5e-64 249.2 183 65.6
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 9.4e-64 247.3 154 71.4
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 1.5e-61 240.0 185 63.2
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 9.7e-61 237.3 182 62.6
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 1.1e-56 223.8 169 65.7
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 1.9e-56 223.0 145 73.1
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 1.6e-55 219.9 186 55.9
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 3.0e-54 215.7 189 54.5
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 3.3e-53 212.2 185 55.7
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 1.3e-52 210.3 187 56.7
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 3.8e-49 198.7 200 50.5
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 4.7e-47 191.8 153 64.1
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 1.5e-45 186.8 109 76.1
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 3.3e-45 185.7 139 67.6
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 7.2e-40 167.9 104 70.2
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 5.7e-37 158.3 106 73.6
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 1.2e-34 150.6 97 75.3
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 1.6e-34 150.2 89 75.3
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 4.5e-34 148.7 94 73.4
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 2.0e-29 133.3 86 70.9
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 7.2e-24 114.8 73 76.7
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 4.0e-22 109.0 73 68.5
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 6.8e-22 108.2 74 71.6
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 2.6e-13 79.7 157 28.7
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.3e-12 77.4 55 61.8
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 1.7e-12 77.0 125 33.6
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 2.1e-07 60.1 41 63.4


User provided reference genes

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