Gene: AT4G17720

General Information

Computational description RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G46870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006364	IMP	Gene Ontology	rRNA processing	1
GO:0034051	IMP	Gene Ontology	negative regulation of plant-type hypersensitive response	2
GO:0050832	IMP	Gene Ontology	defense response to fungus	2
GO:0071226	IDA	Gene Ontology	cellular response to molecule of fungal origin	2

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IPI	Gene Ontology	protein binding	3
GO:0003723	IEA	GOA Database	RNA binding
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISM	Gene Ontology	nucleus
GO:0005829	IDA, HDA	Gene Ontology	cytosol	1 4
GO:0005886	IDA	Gene Ontology	plasma membrane	2

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR035979	RNA-binding domain superfamily
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR000504	RNA recognition motif domain

Mapman id	Description
35.1	not assigned.annotated