Gene: AT4G17610

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G17610
  • Transcript Identifier AT4G17610.2
  • Gene Type Coding gene
  • Location Chr4 : 9805652-9814910 : negative

Gene Family Information

  • ID HOM05D003893
  • #Genes/#Species 179/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G17610.2
  • uniprot F4JP86

Descriptions

  • Description tRNA/rRNA methyltransferase (SpoU) family protein
  • Computational description tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537); Has 6630 Blast hits to 6614 proteins in 1865 species: Archae - 7; Bacteria - 4787; Metazoa - 103; Fungi - 50; Plants - 109; Viruses - 0; Other Eukaryotes - 1574 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001510
ISS
Gene OntologyRNA methylation
GO:0030488
IBA
GOA DatabasetRNA methylation
GO:0030488
IEA
Gene OntologytRNA methylation
GO:0030488
IEA
InterProtRNA methylation
GO:0032259
IEA
GOA Databasemethylation
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
Gene OntologyRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0016423
IBA
GOA DatabasetRNA (guanine) methyltransferase activity
GO:0016423
IEA
Gene OntologytRNA (guanine) methyltransferase activity
GO:0016423
IEA
InterProtRNA (guanine) methyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008173
IEA
GOA DatabaseRNA methyltransferase activity
GO:0008173
IEA
InterProRNA methyltransferase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029028 Alpha/beta knot methyltransferases
IPR044748 Trm3/ TARB1, C-terminal
IPR001537 tRNA/rRNA methyltransferase, SpoU type
IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal
Mapman id Description
16.5.7.8 RNA processing.RNA modification.tRNA methylation.tRNA guanosine-methyltransferase (TRM3)