Gene: AT4G16890

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G16890
  • Transcript Identifier AT4G16890.2
  • Gene Type Coding gene
  • Location Chr4 : 9500506-9505482 : negative

Gene Family Information

  • ID HOM05D000005
  • #Genes/#Species 11550/84
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G16890.2
  • symbol SNC1
  • Alias BAL,BALL
  • full_name SUPPRESSOR OF NPR1-1%2C CONSTITUTIVE 1
  • uniprot O23530

Descriptions

  • Description TIR-NBS-LRR class disease resistance protein
  • Computational description SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1 (SNC1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: response to auxin stimulus, defense response to bacterium, incompatible interaction, defense response, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT4G16920.1); Has 42615 Blast hits to 22768 proteins in 878 species: Archae - 40; Bacteria - 3631; Metazoa - 4485; Fungi - 289; Plants - 31985; Viruses - 14; Other Eukaryotes - 2171 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042742
IMP, IGI
NAS
Gene Ontologydefense response to bacterium1
GO:0006952
IEA
Gene Ontologydefense response
GO:0006952
IEA
InterProdefense response
GO:0007165
IEA
Gene Ontologysignal transduction
GO:0007165
IEA
InterProsignal transduction
GO:0009733
IGI
Gene Ontologyresponse to auxin2
GO:0009862
IMP
Gene Ontologysystemic acquired resistance, salicylic acid mediated signaling pathway3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043531
IEA
Gene OntologyADP binding
GO:0043531
IEA
InterProADP binding
GO:0003953
IEA
Gene OntologyNAD+ nucleosidase activity
GO:0003953
IEA
InterProNAD+ nucleosidase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
ISS
Gene Ontologynucleotide binding3
GO:0005515
IPI
Gene Ontologyprotein binding4
GO:0061809
IEA
Gene OntologyNAD+ nucleotidase, cyclic ADP-ribose generating
GO:0050135
IEA
Gene OntologyNAD(P)+ nucleosidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0043231
IEA
GOA Databaseintracellular membrane-bounded organelle
GO:0043231
IDA
Gene Ontologyintracellular membrane-bounded organelle1
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
Gene Ontologynucleus1
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
ISM
Gene Ontologycytoplasm1
GO:0005829
IDA
Gene Ontologycytosol5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR042197 Apoptotic protease-activating factors, helical domain
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
IPR036390 Winged helix DNA-binding domain superfamily
IPR044974 Disease resistance protein, plants
IPR032675 Leucine-rich repeat domain superfamily
IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily
IPR011713 Leucine-rich repeat 3
IPR002182 NB-ARC
Mapman id Description
26.9.2.1.1 External stimuli response.pathogen.effector-triggered immunity (ETI) network.TNL-mediated effector-triggered immunity.effector receptor (NLR)