Gene: AT4G15180

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G15180
  • Transcript Identifier AT4G15180.1
  • Gene Type Coding gene
  • Location Chr4 : 8651999-8662178 : positive

Gene Family Information

  • ID HOM05D003463
  • #Genes/#Species 197/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G15180.1
  • symbol SDG2
  • Alias ATXR3
  • uniprot O23372

Descriptions

  • Description SET domain protein 2
  • Computational description SET domain protein 2 (SDG2); EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (TAIR:AT1G77300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051568
IEA
GOA Databasehistone H3-K4 methylation
GO:0032259
IEA
GOA Databasemethylation
GO:0006325
IEA
GOA Databasechromatin organization
GO:0016571
IEA
GOA Databasehistone methylation
GO:0034968
IEA
GOA Databasehistone lysine methylation
GO:0048443
IMP
Gene Ontologystamen development1
GO:0048440
IMP
Gene Ontologycarpel development1
GO:0010228
IMP
Gene Ontologyvegetative to reproductive phase transition of meristem1
GO:0009791
IMP
Gene Ontologypost-embryonic development1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0018024
IEA
GOA Databasehistone-lysine N-methyltransferase activity
GO:0042054
IEA
GOA Databasehistone methyltransferase activity
GO:0042800
IDA
Gene Ontologyhistone methyltransferase activity (H3-K4 specific)1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035445 GYF-like domain superfamily
IPR025640 GYF domain 2
IPR001214 SET domain
Mapman id Description
12.3.3.4 Chromatin organisation.post-translational histone modification.histone lysine methylation.class-III histone methyltransferase (Trithorax)