Gene: AT4G15093

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G15093
  • Transcript Identifier AT4G15093.1
  • Gene Type Coding gene
  • Location Chr4 : 8618454-8619472 : positive

Gene Family Information

  • ID HOM05D002390
  • #Genes/#Species 284/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G15093.1
  • symbol LigB
  • uniprot Q949R4

Descriptions

  • Description catalytic LigB subunit of aromatic ring-opening dioxygenase family
  • Computational description catalytic LigB subunit of aromatic ring-opening dioxygenase family; FUNCTIONS IN: oxidoreductase activity, ferrous iron binding, zinc ion binding, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen; INVOLVED IN: oxidation reduction, cellular aromatic compound metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Extradiol aromatic ring-opening dioxygenase, DODA type (InterPro:IPR014436), Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B (InterPro:IPR004183); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006725
IEA
Gene Ontologycellular aromatic compound metabolic process
GO:0006725
IEA
InterProcellular aromatic compound metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008198
IEA
Gene Ontologyferrous iron binding
GO:0008198
IEA
InterProferrous iron binding
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0016701
IEA
Gene Ontologyoxidoreductase activity, acting on single donors with incorporation of molecular oxygen
GO:0016701
IEA
InterProoxidoreductase activity, acting on single donors with incorporation of molecular oxygen
GO:0051213
IEA
GOA Databasedioxygenase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B
IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type
Mapman id Description
35.1 not assigned.annotated