Gene: AT4G15000

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G15000
  • Transcript Identifier AT4G15000.1
  • Gene Type Coding gene
  • Location Chr4 : 8571896-8572303 : positive

Gene Family Information

  • ID HOM05D002059
  • #Genes/#Species 323/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G15000.1
  • uniprot P51419

Descriptions

  • Description Ribosomal L27e protein family
  • Computational description Ribosomal L27e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27e, conserved site (InterPro:IPR018262), Ribosomal protein L27e (InterPro:IPR001141); BEST Arabidopsis thaliana protein match is: Ribosomal L27e protein family (TAIR:AT3G22230.1); Has 764 Blast hits to 764 proteins in 292 species: Archae - 0; Bacteria - 0; Metazoa - 341; Fungi - 149; Plants - 139; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
IEA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
IDA
Gene OntologymRNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022625
IDA
GOA Databasecytosolic large ribosomal subunit
GO:0022625
HDA
IBA
Gene Ontologycytosolic large ribosomal subunit1 3
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome4
GO:0042788
IDA
GOA Databasepolysomal ribosome
GO:0005829
HDA
RCA
Gene Ontologycytosol5 6
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008991 Translation protein SH3-like domain superfamily
IPR041991 Eukaryotic Ribosomal Protein L27, KOW domain
IPR001141 Ribosomal protein L27e
IPR038655 Ribosomal protein L27e superfamily
Mapman id Description
17.1.2.1.27 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL27