Gene: AT4G14990

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G14990
  • Transcript Identifier AT4G14990.1
  • Gene Type Coding gene
  • Location Chr4 : 8566259-8569511 : negative

Gene Family Information

  • ID HOM05D001696
  • #Genes/#Species 382/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G14990.1
  • uniprot Q94C98

Descriptions

  • Description Topoisomerase II-associated protein PAT1
  • Computational description Topoisomerase II-associated protein PAT1; BEST Arabidopsis thaliana protein match is: Topoisomerase II-associated protein PAT1 (TAIR:AT3G22270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000290
IBA
IEA
Gene Ontologydeadenylation-dependent decapping of nuclear-transcribed mRNA1
GO:0000290
IEA
InterProdeadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0033962
IBA
Gene OntologyP-body assembly1
GO:0006397
IEA
GOA DatabasemRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA
GOA DatabasemRNA binding
GO:0003729
HDA
Gene OntologymRNA binding2
GO:0003723
IBA
Gene OntologyRNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0000932
IBA
Gene OntologyP-body1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039900 Pat1-like
Mapman id Description
16.4.2.5 RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA decay factor (PAT1)