Gene: AT4G14800

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G14800
  • Transcript Identifier AT4G14800.1
  • Gene Type Coding gene
  • Location Chr4 : 8500398-8502058 : positive

Gene Family Information

  • ID HOM05D003259
  • #Genes/#Species 210/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G14800.1
  • symbol PBD2
  • uniprot O24633

Descriptions

  • Description 20S proteasome beta subunit D2
  • Computational description 20S proteasome beta subunit D2 (PBD2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit D1 (TAIR:AT3G22630.1); Has 3669 Blast hits to 3669 proteins in 441 species: Archae - 493; Bacteria - 47; Metazoa - 1152; Fungi - 905; Plants - 523; Viruses - 0; Other Eukaryotes - 549 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051603
IEA
Gene Ontologyproteolysis involved in cellular protein catabolic process
GO:0051603
IEA
InterProproteolysis involved in cellular protein catabolic process
GO:0010498
IBA
Gene Ontologyproteasomal protein catabolic process1
GO:0046686
IEP
Gene Ontologyresponse to cadmium ion2
GO:0006511
TAS
Gene Ontologyubiquitin-dependent protein catabolic process3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004298
IEA
Gene Ontologythreonine-type endopeptidase activity
GO:0004298
IEA
InterProthreonine-type endopeptidase activity
GO:0008233
IBA
Gene Ontologypeptidase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019774
ISS, IBA
Gene Ontologyproteasome core complex, beta-subunit complex1
GO:0005839
IBA
TAS, IEA
Gene Ontologyproteasome core complex1 4
GO:0005839
IEA
InterProproteasome core complex
GO:0000502
IEA
GOA Databaseproteasome complex
GO:0000502
IDA
Gene Ontologyproteasome complex5
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IBA
Gene Ontologynucleus1
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005829
HDA
IBA
Gene Ontologycytosol1 6
GO:0099503
HDA
Gene Ontologysecretory vesicle7
GO:0005773
HDA
Gene Ontologyvacuole8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001353 Proteasome, subunit alpha/beta
IPR035206 Proteasome subunit beta 2
IPR029055 Nucleophile aminohydrolases, N-terminal
Mapman id Description
19.2.5.1.2.4 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.beta-type components.component beta type-4