Gene: AT4G12560

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G12560
  • Transcript Identifier AT4G12560.2
  • Gene Type Coding gene
  • Location Chr4 : 7441815-7443157 : positive

Gene Family Information

  • ID HOM05D000007
  • #Genes/#Species 10023/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G12560.2
  • symbol CPR1
  • Alias CPR30,CONSTITUTIVE EXPRESSER OF PR GENES 30
  • full_name CONSTITUTIVE EXPRESSER OF PR GENES 1
  • uniprot Q9SU30

Descriptions

  • Description F-box and associated interaction domains-containing protein
  • Computational description CONSTITUTIVE EXPRESSER OF PR GENES 30 (CPR30); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT4G22390.1); Has 1743 Blast hits to 1730 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1741; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
  • Computational description CONSTITUTIVE EXPRESSER OF PR GENES 30 (CPR30); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of defense response; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT4G22390.1); Has 1743 Blast hits to 1730 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1741; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination
GO:0031348
IMP
Gene Ontologynegative regulation of defense response1
GO:0042177
IMP
Gene Ontologynegative regulation of protein catabolic process2
GO:0006952
IEA
GOA Databasedefense response
GO:0009626
IEA
GOA Databaseplant-type hypersensitive response

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
Gene Ontologynucleus1
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
Gene Ontologycytoplasm1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001810 F-box domain
IPR006527 F-box associated domain, type 1
IPR036047 F-box-like domain superfamily
IPR017451 F-box associated interaction domain
Mapman id Description
35.1 not assigned.annotated