Gene: AT4G12460

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G12460
  • Transcript Identifier AT4G12460.5
  • Gene Type Coding gene
  • Location Chr4 : 7391400-7395560 : positive

Gene Family Information

  • ID HOM05D000933
  • #Genes/#Species 645/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G12460.5
  • symbol ORP2B
  • uniprot Q9SU36

Descriptions

  • Description OSBP(oxysterol binding protein)-related protein 2B
  • Computational description OSBP(oxysterol binding protein)-related protein 2B (ORP2B); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Oxysterol-binding protein (InterPro:IPR000648), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 2A (TAIR:AT4G22540.1); Has 2708 Blast hits to 2476 proteins in 219 species: Archae - 0; Bacteria - 2; Metazoa - 1436; Fungi - 690; Plants - 296; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015918
IEA
GOA Databasesterol transport
GO:0006869
IEA
GOA Databaselipid transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008289
IEA
Gene Ontologylipid binding
GO:0008289
IEA
InterProlipid binding
GO:0032934
IBA
Gene Ontologysterol binding1
GO:0015248
IBA
Gene Ontologysterol transporter activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0016020
IBA
Gene Ontologymembrane1
GO:0005829
IBA
Gene Ontologycytosol1
GO:0043231
IBA
Gene Ontologyintracellular membrane-bounded organelle1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037239 Oxysterol-binding protein superfamily
IPR011993 PH-like domain superfamily
IPR000648 Oxysterol-binding protein
IPR001849 Pleckstrin homology domain
Mapman id Description
35.1 not assigned.annotated