Gene: AT4G11840

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G11840
  • Transcript Identifier AT4G11840.1
  • Gene Type Coding gene
  • Location Chr4 : 7122152-7125882 : negative

Gene Family Information

  • ID HOM05D000315
  • #Genes/#Species 1462/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G11840.1
  • symbol PLDGAMMA3
  • uniprot Q9T052

Descriptions

  • Description phospholipase D gamma 3
  • Computational description phospholipase D gamma 3 (PLDGAMMA3); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D gamma 2 (TAIR:AT4G11830.2); Has 2125 Blast hits to 1669 proteins in 399 species: Archae - 2; Bacteria - 519; Metazoa - 437; Fungi - 453; Plants - 551; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006643
ISO
PLAZA Integrative Orthologymembrane lipid metabolic process AT4G11830
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT4G11830
GO:0046470
IEA
Gene Ontologyphosphatidylcholine metabolic process
GO:0046470
IEA
InterProphosphatidylcholine metabolic process
GO:0016042
IEA
GOA Databaselipid catabolic process
GO:0006629
IEA
GOA Databaselipid metabolic process
GO:0009395
IBA
Gene Ontologyphospholipid catabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0005509
IEA
Gene Ontologycalcium ion binding
GO:0005509
IEA
InterProcalcium ion binding
GO:0004630
ISS, IBA
IEA
Gene Ontologyphospholipase D activity1
GO:0004630
IEA
InterProphospholipase D activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0070290
IEA
Gene OntologyN-acylphosphatidylethanolamine-specific phospholipase D activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT4G11830
GO:0016020
IEA
Gene Ontologymembrane
GO:0016020
IEA
InterPromembrane
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005886
IBA
Gene Ontologyplasma membrane1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011402 Phospholipase D, plant
IPR035892 C2 domain superfamily
IPR024632 Phospholipase D, C-terminal
IPR000008 C2 domain
IPR015679 Phospholipase D family
IPR001736 Phospholipase D/Transphosphatidylase
Mapman id Description
5.7.2.4.2 Lipid metabolism.lipid degradation.phospholipase activities.phospholipase D activities.phospholipase D (PLD-beta/gamma)