Gene: AT4G11560

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G11560
  • Transcript Identifier AT4G11560.1
  • Gene Type Coding gene
  • Location Chr4 : 7000095-7003445 : negative

Gene Family Information

  • ID HOM05D001502
  • #Genes/#Species 422/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G11560.1
  • uniprot Q8RXT5

Descriptions

  • Description bromo-adjacent homology (BAH) domain-containing protein
  • Computational description bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT2G25120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
Gene Ontologytranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0045892
IEA
GOA Databasenegative regulation of transcription, DNA-templated
GO:0006325
IEA
GOA Databasechromatin organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003682
IEA
Gene Ontologychromatin binding
GO:0003682
IEA
InterProchromatin binding
GO:0001217
IDA
Gene OntologyDNA-binding transcription repressor activity1
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0061628
IDA
Gene OntologyH3K27me3 modified histone binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003618 Transcription elongation factor S-II, central domain
IPR036575 Transcription elongation factor S-II, central domain superfamily
IPR001025 Bromo adjacent homology (BAH) domain
IPR043151 Bromo adjacent homology (BAH) domain superfamily
Mapman id Description
35.1 not assigned.annotated