Gene: AT4G10180

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G10180
  • Transcript Identifier AT4G10180.1
  • Gene Type Coding gene
  • Location Chr4 : 6346543-6349146 : positive

Gene Family Information

  • ID HOM05D006383
  • #Genes/#Species 125/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G10180.1
  • symbol DET1
  • Alias ATDET1,FUS2,FUSCA 2
  • full_name DE-ETIOLATED 1
  • uniprot P48732

Descriptions

  • Description light-mediated development protein 1 / deetiolated1 (DET1)
  • Computational description DE-ETIOLATED 1 (DET1); FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, negative regulation of photomorphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: De-etiolated protein 1, Det1 (InterPro:IPR019138), Six-hairpin glycosidase-like (InterPro:IPR008928); Has 248 Blast hits to 240 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032436
IBA
Gene Ontologypositive regulation of proteasomal ubiquitin-dependent protein catabolic process1
GO:0005975
IEA
Gene Ontologycarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0010017
IEA
GOA Databasered or far-red light signaling pathway
GO:0009585
IEA
GOA Databasered, far-red light phototransduction
GO:0016567
IBA
Gene Ontologyprotein ubiquitination1
GO:0006281
IMP
Gene OntologyDNA repair2
GO:0010100
IMP
Gene Ontologynegative regulation of photomorphogenesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Solyc01g056340.4
GO:1990756
IBA
Gene Ontologyubiquitin ligase-substrate adaptor activity1
GO:0031625
IBA
Gene Ontologyubiquitin protein ligase binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus1 3
GO:0005654
IEA
GOA Databasenucleoplasm
GO:0031461
IBA
Gene Ontologycullin-RING ubiquitin ligase complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019138 De-etiolated protein 1, Det1
IPR008928 Six-hairpin glycosidase superfamily
Mapman id Description
19.2.2.8.3.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.COP10-DET1 module.regulator component DET1