Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 0.0e+00 1085.5 544 100.0
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 1.0e-296 1022.7 545 94.7
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 4.0e-280 967.6 544 90.1
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 6.8e-280 966.8 549 89.8
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 1.2e-279 966.1 544 90.1
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 3.5e-276 954.5 547 89.0
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 5.9e-276 953.7 547 88.8
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 7.7e-276 953.4 547 88.8
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 1.7e-275 952.2 545 89.4
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 1.7e-275 952.2 545 89.4
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 1.8e-269 932.2 544 87.1
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 2.3e-267 925.2 544 86.6
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 6.0e-260 900.6 548 82.7
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 1.1e-253 879.8 546 82.1
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 3.8e-222 775.0 545 72.3
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 1.1e-221 773.5 567 70.2
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 1.6e-220 769.6 543 72.2
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 6.0e-220 767.7 545 71.0
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 7.9e-220 767.3 542 71.4
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 1.3e-219 766.5 545 70.6
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 6.7e-219 764.2 545 70.1
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 5.6e-218 761.1 545 70.8
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 1.3e-217 760.0 545 71.7
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 1.3e-217 760.0 554 70.0
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 2.8e-217 758.8 544 69.7
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 4.8e-217 758.1 545 70.5
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 1.4e-216 756.5 544 69.9
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 2.4e-216 755.7 545 69.9
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 2.4e-216 755.7 545 70.5
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 3.1e-216 755.4 545 70.5
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 2.6e-215 752.3 545 69.4
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 2.6e-215 752.3 544 68.8
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 5.8e-215 751.1 545 69.7
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 1.3e-214 750.0 545 69.9
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 4.2e-213 745.0 552 69.7
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 4.2e-213 745.0 545 69.7
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 1.2e-212 743.4 545 70.5
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 6.0e-212 741.1 532 70.9
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 5.1e-211 738.0 545 69.9
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 4.3e-210 734.9 546 68.7
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 3.7e-209 731.9 545 68.8
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 6.2e-209 731.1 545 67.9
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 8.2e-209 730.7 543 68.7
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 1.4e-208 729.9 551 69.0
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 1.8e-208 729.6 548 68.1
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 6.9e-208 727.6 548 68.2
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 1.0e-206 723.8 545 67.9
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 1.3e-206 723.4 545 67.7
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 1.2e-204 716.8 547 67.1
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.0e-203 713.8 546 67.4
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 3.0e-203 712.2 546 67.2
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 3.9e-203 711.8 541 66.7
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 5.1e-203 711.4 628 60.8
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 1.9e-202 709.5 546 66.8
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 1.3e-201 706.8 547 66.9
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 2.2e-201 706.1 546 66.7
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 3.7e-201 705.3 551 66.2
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 1.4e-200 703.4 546 67.6
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 1.5e-199 699.9 580 64.0
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 3.4e-199 698.7 547 67.1
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 5.9e-199 698.0 545 66.2
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 5.9e-199 698.0 545 66.6
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 1.0e-198 697.2 546 64.7
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 8.5e-198 694.1 543 65.6
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 7.9e-196 687.6 496 69.6
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 7.9e-196 687.6 548 65.1
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 1.1e-192 677.2 548 65.9
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 1.4e-192 676.8 544 63.1
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 1.0e-190 670.6 561 61.9
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 1.4e-187 660.2 628 58.0
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 9.7e-186 654.1 470 70.6
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 8.2e-185 651.0 544 61.4
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 1.1e-184 650.6 544 61.2
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 3.1e-184 649.0 545 63.3
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 1.8e-179 633.3 448 72.1
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 3.9e-179 632.1 482 68.5
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 6.7e-179 631.3 589 57.2
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 6.7e-179 631.3 589 57.2
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 1.1e-176 624.0 499 63.9
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 3.5e-175 619.0 546 60.3
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 4.5e-175 618.6 614 56.2
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 1.0e-174 617.5 657 52.5
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.7e-174 616.7 607 56.7
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 1.9e-173 613.2 460 69.6
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 7.5e-170 601.3 499 62.5
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 4.7e-164 582.0 467 65.1
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 2.9e-158 562.8 414 70.3
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 2.0e-154 550.1 544 55.0
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 2.0e-154 550.1 553 52.4
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 2.7e-151 539.7 545 53.4
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 5.8e-146 521.9 444 62.6
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 3.5e-143 512.7 497 55.9
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 2.8e-132 476.5 354 69.2
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 1.2e-124 451.1 375 62.9
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 2.4e-120 436.8 517 48.5
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 5.6e-117 425.6 379 59.1
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 1.3e-116 424.5 885 33.4
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 3.2e-112 409.8 846 34.5
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 3.9e-110 402.9 892 31.8
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 1.5e-109 401.0 309 66.0
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 1.5e-106 391.0 971 31.9
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 3.4e-106 389.8 958 31.1
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 7.6e-106 388.7 237 81.4
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 8.4e-105 385.2 316 64.2
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 3.3e-101 373.2 293 64.5
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 1.4e-99 367.9 314 62.7
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 8.7e-94 348.6 315 58.4
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 9.6e-93 345.1 246 70.3
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 1.4e-91 341.3 263 65.0
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 1.8e-78 297.7 196 75.0
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 3.0e-70 270.4 267 55.4
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 2.6e-69 267.3 292 49.7
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 7.4e-69 265.8 170 77.6
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 1.6e-34 151.8 131 61.8
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 1.4e-30 138.7 106 66.0
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 2.9e-28 131.0 788 24.0
Zm00001eb129170 Zea mays HOM05D006383 ORTHO05D007815 7.3e-24 116.3 103 58.3
Zm00001eb417300 Zea mays HOM05D006383 ORTHO05D007815 1.9e-19 101.7 113 53.1
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 4.0e-14 84.0 247 27.1
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 5.2e-14 83.6 251 25.5
Glyma.13G043200 Glycine max HOM05D006383 ORTHO05D007815 4.9e-12 77.0 68 57.4
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 3.5e-10 70.9 53 69.8
MBI11_g43687_MAGBIO Magnolia biondii HOM05D006383 ORTHO05D007815 1.1e-08 65.9 51 62.7
MCO10G269 Micromonas commoda HOM05D006383 ORTHO05D007815 2.8e-07 61.2 71 42.3
Actinidia02533 Actinidia chinensis HOM05D006383 ORTHO05D007815 6.2e-07 60.1 34 82.4
SEGI_16502 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 1.4e-06 58.9 49 57.1


User provided reference genes

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