Gene: AT4G09620
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G09620
- Transcript Identifier AT4G09620.1
- Gene Type Coding gene
- Location Chr4 : 6077122-6078899 : negative
Gene Family Information
- ID HOM05D007304
- #Genes/#Species 107/92
- Phylogenetic origin
- ID ORTHO05D009233
- #Genes/#Species 106/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G09620.1
- uniprot Q9SST2
Descriptions
- Description Mitochondrial transcription termination factor family protein
- Computational description Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); Has 234 Blast hits to 198 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | Gene Ontology | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0006353 | IEA | GOA Database | DNA-templated transcription, termination |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003690 | IEA | Gene Ontology | double-stranded DNA binding | |
| GO:0003690 | IEA | InterPro | double-stranded DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | IDA, HDA | Gene Ontology | chloroplast | 1 2 |
| GO:0005829 | HDA | Gene Ontology | cytosol | 3 |
| GO:0042646 | IDA | Gene Ontology | plastid nucleoid | 4 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.6.2.2 | RNA biosynthesis.organelle machinery.transcriptional regulation.transcription factor (mTERF) |