Gene: AT4G09420
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G09420
- Transcript Identifier AT4G09420.1
- Gene Type Coding gene
- Location Chr4 : 5962319-5963776 : negative
Gene Family Information
- ID HOM05D000005
- #Genes/#Species 11550/84
- Phylogenetic origin
- ID ORTHO05D012948
- #Genes/#Species 19/9
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT4G09420.1
- uniprot Q9M0Q0
Descriptions
- Description Disease resistance protein (TIR-NBS class)
- Computational description Disease resistance protein (TIR-NBS class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: shoot apex, cotyledon, leaf whorl, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, 4 leaf senescence stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS class) (TAIR:AT1G72850.1); Has 8163 Blast hits to 8050 proteins in 270 species: Archae - 0; Bacteria - 112; Metazoa - 6; Fungi - 2; Plants - 8040; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006952 | IEA | Gene Ontology | defense response | |
GO:0006952 | IEA | InterPro | defense response | |
GO:0007165 | IEA | Gene Ontology | signal transduction | |
GO:0007165 | IEA | InterPro | signal transduction |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003953 | IEA | Gene Ontology | NAD+ nucleosidase activity | |
GO:0003953 | IEA | InterPro | NAD+ nucleosidase activity | |
GO:0043531 | IEA | Gene Ontology | ADP binding | |
GO:0043531 | IEA | InterPro | ADP binding | |
GO:0016787 | IEA | GOA Database | hydrolase activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009507 | ISM | Gene Ontology | chloroplast |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR035897 | Toll/interleukin-1 receptor homology (TIR) domain superfamily |
IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain |
IPR044974 | Disease resistance protein, plants |
IPR002182 | NB-ARC |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
IPR042197 | Apoptotic protease-activating factors, helical domain |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |