Gene: AT4G08870

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G08870
  • Transcript Identifier AT4G08870.1
  • Gene Type Coding gene
  • Location Chr4 : 5646654-5648693 : negative

Gene Family Information

  • ID HOM05D004324
  • #Genes/#Species 165/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G08870.1
  • symbol ARGAH2
  • full_name arginine amidohydrolase 2
  • uniprot Q9ZPF5

Descriptions

  • Description Arginase/deacetylase superfamily protein
  • Computational description Arginase/deacetylase superfamily protein; FUNCTIONS IN: arginase activity, cobalt ion binding, agmatinase activity; INVOLVED IN: response to jasmonic acid stimulus, polyamine metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: sepal vascular system, cotyledon vascular system, root vascular system, style, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ureohydrolase (InterPro:IPR006035); BEST Arabidopsis thaliana protein match is: arginase (TAIR:AT4G08900.1); Has 8845 Blast hits to 8843 proteins in 1673 species: Archae - 297; Bacteria - 4692; Metazoa - 410; Fungi - 370; Plants - 72; Viruses - 0; Other Eukaryotes - 3004 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009446
IEA
GOA Databaseputrescine biosynthetic process
GO:0009446
IDA, IGI
Gene Ontologyputrescine biosynthetic process1
GO:0006525
IEA
GOA Databasearginine metabolic process
GO:0033388
IEA
GOA Databaseputrescine biosynthetic process from arginine
GO:0033389
IDA
IBA
Gene Ontologyputrescine biosynthetic process from arginine, using agmatinase1 2
GO:0000050
IEA
Gene Ontologyurea cycle
GO:0050832
IMP
Gene Ontologydefense response to fungus3
GO:0009445
IMP
Gene Ontologyputrescine metabolic process3
GO:0006591
IMP
Gene Ontologyornithine metabolic process3
GO:0006570
IMP
Gene Ontologytyrosine metabolic process3
GO:0006560
IMP
Gene Ontologyproline metabolic process3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0050897
IDA
GOA Databasecobalt ion binding
GO:0050897
HDA
Gene Ontologycobalt ion binding4
GO:0008783
IEA
GOA Databaseagmatinase activity
GO:0008783
IDA
IBA
Gene Ontologyagmatinase activity1 2
GO:0004053
IEA
GOA Databasearginase activity
GO:0004053
IDA, IGI
Gene Ontologyarginase activity3 5

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
HDA
Gene Ontologycytosol6
GO:0009536
IEA
GOA Databaseplastid
GO:0005739
IDA
IEA
GOA Databasemitochondrion
GO:0005739
HDA
ISM
Gene Ontologymitochondrion7
GO:0009507
IEA
GOA Databasechloroplast
GO:0009570
IDA
Gene Ontologychloroplast stroma1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006035 Ureohydrolase
IPR023696 Ureohydrolase domain superfamily
Mapman id Description
4.2.1.1 Amino acid metabolism.degradation.arginine.arginase