Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G08870 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 8.6e-196 686.8 345 100.0
Carub.0006s2736 Capsella rubella HOM05D004324 ORTHO05D004840 3.0e-188 661.8 345 95.9
Sp6g08900 Schrenkiella parvula HOM05D004324 ORTHO05D004840 2.9e-167 592.0 342 86.0
A03p28290 Brassica napus HOM05D004324 ORTHO05D004840 4.9e-167 591.3 343 85.4
BcaB01g02843 Brassica carinata HOM05D004324 ORTHO05D004840 8.4e-167 590.5 345 85.5
C03p34220 Brassica napus HOM05D004324 ORTHO05D004840 8.4e-167 590.5 345 84.9
BraA03t12035Z Brassica rapa HOM05D004324 ORTHO05D004840 8.4e-167 590.5 343 85.4
BcaC01g04748 Brassica carinata HOM05D004324 ORTHO05D004840 1.9e-166 589.3 345 84.9
BolC3t15731H Brassica oleracea HOM05D004324 ORTHO05D004840 1.9e-166 589.3 345 84.6
AL6G41660 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 7.1e-166 587.4 342 86.3
AT4G08900 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 7.1e-166 587.4 342 86.3
CARHR259850 Cardamine hirsuta HOM05D004324 ORTHO05D004840 2.1e-165 585.9 342 85.7
Carub.0006s2738 Capsella rubella HOM05D004324 ORTHO05D004840 5.1e-164 581.3 342 85.7
Aa31LG9G14610 Aethionema arabicum HOM05D004324 ORTHO05D004840 1.1e-163 580.1 345 83.8
THA.LOC104826515 Tarenaya hassleriana HOM05D004324 ORTHO05D004840 1.5e-163 579.7 345 83.8
Thhalv10028793m.g Eutrema salsugineum HOM05D004324 ORTHO05D004840 8.1e-162 573.9 345 84.3
Cpa.g.sc145.18 Carica papaya HOM05D004324 ORTHO05D004840 1.4e-161 573.2 345 82.9
COL.COLO4_24610 Corchorus olitorius HOM05D004324 ORTHO05D004840 4.0e-161 571.6 342 83.0
Manes.01G267300 Manihot esculenta HOM05D004324 ORTHO05D004840 4.0e-161 571.6 342 83.0
RcHm_v2.0_Chr1g0349771 Rosa chinensis HOM05D004324 ORTHO05D004840 5.2e-161 571.2 342 83.3
Ciclev10021006m.g Citrus clementina HOM05D004324 ORTHO05D004840 8.9e-161 570.5 342 82.5
PSO782G5694 Papaver somniferum HOM05D004324 ORTHO05D004840 1.2e-160 570.1 345 81.4
Peaxi162Scf00013g03018 Petunia axillaris HOM05D004324 ORTHO05D004840 1.5e-160 569.7 345 81.2
Sc26g0001250 Simmondsia chinensis HOM05D004324 ORTHO05D004840 2.6e-160 568.9 345 81.7
Nitab4.5_0000457g0100 Nicotiana tabacum HOM05D004324 ORTHO05D004840 3.4e-160 568.5 345 81.2
TAR375G0703 Trochodendron aralioides HOM05D004324 ORTHO05D004840 4.4e-160 568.2 345 82.0
Lsat_1_v5_gn_4_43080 Lactuca sativa HOM05D004324 ORTHO05D004840 5.8e-160 567.8 345 81.2
Solyc01g091160.4 Solanum lycopersicum HOM05D004324 ORTHO05D004840 5.8e-160 567.8 345 81.4
Sopen01g036910 Solanum pennellii HOM05D004324 ORTHO05D004840 5.8e-160 567.8 345 81.4
Dinv32365 Davidia involucrata HOM05D004324 ORTHO05D004840 7.6e-160 567.4 345 81.4
Gorai.009G265900 Gossypium raimondii HOM05D004324 ORTHO05D004840 9.9e-160 567.0 340 83.5
Prupe.2G142300 Prunus persica HOM05D004324 ORTHO05D004840 9.9e-160 567.0 342 82.7
FAN03G2758 Fragaria x ananassa HOM05D004324 ORTHO05D004840 1.7e-159 566.2 342 82.5
FAN06G1729 Fragaria x ananassa HOM05D004324 ORTHO05D004840 1.7e-159 566.2 342 82.5
FAN06G4220 Fragaria x ananassa HOM05D004324 ORTHO05D004840 1.7e-159 566.2 342 82.5
Nn1g01122 Nelumbo nucifera HOM05D004324 ORTHO05D004840 1.7e-159 566.2 345 80.6
Aqoxy7G00682 Aquilegia oxysepala HOM05D004324 ORTHO05D004840 2.2e-159 565.8 345 80.6
Gohir.D05G254400 Gossypium hirsutum HOM05D004324 ORTHO05D004840 2.2e-159 565.8 340 83.2
Duzib268G1605 Durio zibethinus HOM05D004324 ORTHO05D004840 2.9e-159 565.5 342 81.9
Thecc.08G173700 Theobroma cacao HOM05D004324 ORTHO05D004840 2.9e-159 565.5 339 82.9
CAN.G388.33 Capsicum annuum HOM05D004324 ORTHO05D004840 3.8e-159 565.1 344 80.5
Thecc.08G173500 Theobroma cacao HOM05D004324 ORTHO05D004840 3.8e-159 565.1 339 82.9
Duzib177G0253 Durio zibethinus HOM05D004324 ORTHO05D004840 4.9e-159 564.7 342 82.2
ECA234G2725 Erigeron canadensis HOM05D004324 ORTHO05D004840 4.9e-159 564.7 345 81.2
PSO478G0881 Papaver somniferum HOM05D004324 ORTHO05D004840 4.9e-159 564.7 345 80.9
FAN01G0081 Fragaria x ananassa HOM05D004324 ORTHO05D004840 6.4e-159 564.3 342 82.2
Manes.05G047100 Manihot esculenta HOM05D004324 ORTHO05D004840 6.4e-159 564.3 342 82.2
Sc26g0001240 Simmondsia chinensis HOM05D004324 ORTHO05D004840 8.4e-159 563.9 345 80.9
GSVIVG01027662001 Vitis vinifera HOM05D004324 ORTHO05D004840 8.4e-159 563.9 344 80.8
EL10Ac1g00868 Beta vulgaris HOM05D004324 ORTHO05D004840 1.1e-158 563.5 345 80.9
Nitab4.5_0010616g0050 Nicotiana tabacum HOM05D004324 ORTHO05D004840 1.1e-158 563.5 341 81.2
Hma1.2p1_0442F.1_g153860 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 1.9e-158 562.8 343 80.5
MD07G1119200 Malus domestica HOM05D004324 ORTHO05D004840 1.9e-158 562.8 342 82.2
Solyc01g091170.3 Solanum lycopersicum HOM05D004324 ORTHO05D004840 2.4e-158 562.4 345 81.4
Sopen01g036920 Solanum pennellii HOM05D004324 ORTHO05D004840 2.4e-158 562.4 345 81.4
Potri.002G146200 Populus trichocarpa HOM05D004324 ORTHO05D004840 4.2e-158 561.6 342 82.2
AUR62013655 Chenopodium quinoa HOM05D004324 ORTHO05D004840 5.4e-158 561.2 345 79.7
QL08p052832 Quercus lobata HOM05D004324 ORTHO05D004840 5.4e-158 561.2 344 81.7
PGR042G0702 Punica granatum HOM05D004324 ORTHO05D004840 7.1e-158 560.8 342 81.0
Potri.014G067700 Populus trichocarpa HOM05D004324 ORTHO05D004840 1.2e-157 560.1 339 82.6
Atru.chr5.282 Acer truncatum HOM05D004324 ORTHO05D004840 1.6e-157 559.7 342 81.6
MSTRG.17174 Avicennia marina HOM05D004324 ORTHO05D004840 1.6e-157 559.7 345 79.1
Eucgr.E01445 Eucalyptus grandis HOM05D004324 ORTHO05D004840 1.6e-157 559.7 345 81.2
CSS0015452 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 4.6e-157 558.1 345 80.3
CSS0042374 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 4.6e-157 558.1 345 80.3
CANSAT56G0022 Cannabis sativa HOM05D004324 ORTHO05D004840 4.6e-157 558.1 343 81.9
HanXRQChr16g0519961 Helianthus annuus HOM05D004324 ORTHO05D004840 6.0e-157 557.8 341 80.6
ClCG06G000480 Citrullus lanatus HOM05D004324 ORTHO05D004840 7.8e-157 557.4 342 80.4
vmacro13417 Vaccinium macrocarpon HOM05D004324 ORTHO05D004840 1.0e-156 557.0 345 79.4
CiPaw.01G263900 Carya illinoinensis HOM05D004324 ORTHO05D004840 1.3e-156 556.6 345 80.6
SalBow5G2819 Salvia bowleyana HOM05D004324 ORTHO05D004840 1.3e-156 556.6 345 79.4
TWI59G0845 Tripterygium wilfordii HOM05D004324 ORTHO05D004840 5.1e-156 554.7 342 79.5
Cc02_g24110 Coffea canephora HOM05D004324 ORTHO05D004840 8.7e-156 553.9 345 79.7
Actinidia12245 Actinidia chinensis HOM05D004324 ORTHO05D004840 1.1e-155 553.5 345 80.0
AUR62004190 Chenopodium quinoa HOM05D004324 ORTHO05D004840 2.5e-155 552.4 345 78.3
RcHm_v2.0_Chr1g0349751 Rosa chinensis HOM05D004324 ORTHO05D004840 2.5e-155 552.4 341 83.0
Hund27368 Selenicereus undatus HOM05D004324 ORTHO05D004840 4.3e-155 551.6 333 81.4
Os04g0106300 Oryza sativa ssp. japonica HOM05D004324 ORTHO05D004840 7.3e-155 550.8 341 80.6
CsaV3_6G006290 Cucumis sativus L. HOM05D004324 ORTHO05D004840 9.6e-155 550.4 342 79.5
Migut.B01616 Erythranthe guttata HOM05D004324 ORTHO05D004840 9.6e-155 550.4 342 78.9
SGA_v2.0_scaffold153G36989 Striga asiatica HOM05D004324 ORTHO05D004840 2.1e-154 549.3 345 78.0
DCAR_008551 Daucus carota HOM05D004324 ORTHO05D004840 4.8e-154 548.1 333 81.4
Lj3g0002034 Lotus japonicus HOM05D004324 ORTHO05D004840 6.2e-154 547.7 345 79.1
SHI13535 Sapria himalayana HOM05D004324 ORTHO05D004840 8.1e-154 547.4 341 79.5
HPP92_007375 Vanilla planifolia HOM05D004324 ORTHO05D004840 1.1e-153 547.0 341 78.3
Ah.05g174550 Amaranthus hybridus HOM05D004324 ORTHO05D004840 2.4e-153 545.8 345 78.6
Lalb_Chr12g0208141 Lupinus albus HOM05D004324 ORTHO05D004840 2.4e-153 545.8 345 78.8
Rhsim07G0029000 Rhododendron simsii HOM05D004324 ORTHO05D004840 2.4e-153 545.8 368 75.0
Ca_19938_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 3.1e-153 545.4 345 78.8
TPR.G7599 Trifolium pratense HOM05D004324 ORTHO05D004840 3.1e-153 545.4 345 78.3
Oeu055504.4 Olea europaea HOM05D004324 ORTHO05D004840 4.0e-153 545.0 382 72.8
Sed0016777 Sechium edule HOM05D004324 ORTHO05D004840 5.3e-153 544.7 342 79.2
ATR0665G432 Amborella trichopoda HOM05D004324 ORTHO05D004840 9.0e-153 543.9 335 79.7
Glyma.01G140200 Glycine max HOM05D004324 ORTHO05D004840 1.2e-152 543.5 342 79.2
Psat0s3070g0160 Pisum sativum HOM05D004324 ORTHO05D004840 4.5e-152 541.6 345 77.4
unitig_899.g15094 Utricularia gibba HOM05D004324 ORTHO05D004840 4.5e-152 541.6 333 80.2
Glyma.17G131300 Glycine max HOM05D004324 ORTHO05D004840 5.8e-152 541.2 342 79.2
CDE04G0300 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 9.9e-152 540.4 320 81.9
Lj3g0015076 Lotus japonicus HOM05D004324 ORTHO05D004840 1.3e-151 540.0 342 77.5
CSS0002473 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 4.9e-151 538.1 315 83.8
Glyma.03G028000 Glycine max HOM05D004324 ORTHO05D004840 3.2e-150 535.4 343 77.0
Phvul.010G081600 Phaseolus vulgaris HOM05D004324 ORTHO05D004840 7.1e-150 534.3 331 79.8
Haze_16793 Corylus avellana HOM05D004324 ORTHO05D004840 1.1e-145 520.4 353 75.1
Mapoly0082s0038 Marchantia polymorpha HOM05D004324 ORTHO05D004840 1.1e-145 520.4 321 78.5
SEGI_09298 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 2.4e-145 519.2 345 74.8
Lj3g0008609 Lotus japonicus HOM05D004324 ORTHO05D004840 4.0e-145 518.5 342 75.1
CiPaw.02G169300 Carya illinoinensis HOM05D004324 ORTHO05D004840 6.9e-145 517.7 333 76.6
Lj3g0012371 Lotus japonicus HOM05D004324 ORTHO05D004840 9.0e-145 517.3 344 75.3
arahy.Tifrunner.gnm1.ann1.2VF8XD Arachis hypogaea HOM05D004324 ORTHO05D004840 2.0e-144 516.2 373 71.8
arahy.Tifrunner.gnm1.ann1.J6F3FE Arachis hypogaea HOM05D004324 ORTHO05D004840 1.0e-140 503.8 397 67.5
Medtr4g024960 Medicago truncatula HOM05D004324 ORTHO05D004840 3.9e-140 501.9 345 72.8
SMO367G0287 Selaginella moellendorffii HOM05D004324 ORTHO05D004840 8.7e-140 500.7 317 76.7
HanXRQChr16g0519941 Helianthus annuus HOM05D004324 ORTHO05D004840 5.3e-137 491.5 342 72.2
TPR.G7597 Trifolium pratense HOM05D004324 ORTHO05D004840 6.9e-137 491.1 349 71.9
Lj7A531T56 Lonicera japonica HOM05D004324 ORTHO05D004840 1.2e-133 480.3 345 71.6
Pp3c5_2190 Physcomitrium patens HOM05D004324 ORTHO05D004840 2.5e-131 472.6 335 69.3
CBR_g50887 Chara braunii HOM05D004324 ORTHO05D004840 6.9e-129 464.5 312 72.1
Psat7g231720 Pisum sativum HOM05D004324 ORTHO05D004840 1.6e-125 453.4 333 67.0
COL.COLO4_24608 Corchorus olitorius HOM05D004324 ORTHO05D004840 5.1e-116 421.8 339 64.9
Sed0023731 Sechium edule HOM05D004324 ORTHO05D004840 2.0e-112 409.8 255 78.8
MELO3C022492.2 Cucumis melo HOM05D004324 ORTHO05D004840 1.7e-111 406.8 239 83.7
Atru.chr5.284 Acer truncatum HOM05D004324 ORTHO05D004840 2.2e-111 406.4 255 81.2
Dinv43690 Davidia involucrata HOM05D004324 ORTHO05D004840 1.6e-109 400.2 345 62.6
AL6G42680 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 1.7e-106 390.2 194 99.5
SEGI_04392 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 6.3e-106 388.3 249 77.5
Hma1.2p1_0375F.1_g138670 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 7.7e-104 381.3 245 78.8
Zm00001eb418690 Zea mays HOM05D004324 ORTHO05D004840 4.0e-100 369.0 208 88.0
Medtr4g024940 Medicago truncatula HOM05D004324 ORTHO05D004840 9.7e-99 364.4 237 75.5
arahy.Tifrunner.gnm1.ann1.J17N2W Arachis hypogaea HOM05D004324 ORTHO05D004840 1.4e-97 360.5 332 59.0
FvH4_7g11450 Fragaria vesca HOM05D004324 ORTHO05D004840 5.9e-96 355.1 222 79.3
MBI04_g35670_MAGBIO Magnolia biondii HOM05D004324 ORTHO05D004840 8.5e-95 351.3 226 75.7
Psat6g218040 Pisum sativum HOM05D004324 ORTHO05D004840 3.2e-94 349.4 309 57.0
Medtr0088s0100 Medicago truncatula HOM05D004324 ORTHO05D004840 2.5e-86 323.2 323 54.2
AagrBONN_evm.TU.Sc2ySwM_368.1743 Anthoceros agrestis HOM05D004324 ORTHO05D004840 1.2e-85 320.9 194 78.9
Gohir.A05G252532 Gossypium hirsutum HOM05D004324 ORTHO05D004840 1.2e-83 314.3 194 79.4
SGA_v2.0_scaffold11G05569 Striga asiatica HOM05D004324 ORTHO05D004840 1.7e-79 300.4 242 64.0
AL6G42730 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 3.6e-77 292.7 151 97.4
Psat6g218080 Pisum sativum HOM05D004324 ORTHO05D004840 8.9e-76 288.1 195 68.7
Sc26g0001270 Simmondsia chinensis HOM05D004324 ORTHO05D004840 7.8e-72 275.0 171 77.8
Gohir.A05G252466 Gossypium hirsutum HOM05D004324 ORTHO05D004840 1.8e-60 237.3 135 88.1
RcHm_v2.0_Chr1g0349761 Rosa chinensis HOM05D004324 ORTHO05D004840 4.6e-56 222.6 148 74.3
Psat6g217960 Pisum sativum HOM05D004324 ORTHO05D004840 2.4e-52 210.3 155 65.8
CDE02G4314 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 2.1e-40 170.6 148 62.8
arahy.Tifrunner.gnm1.ann1.V33WN8 Arachis hypogaea HOM05D004324 ORTHO05D004840 2.0e-35 154.1 87 85.1
MD02G1206600 Malus domestica HOM05D004324 ORTHO05D004840 2.1e-32 144.1 82 84.1
Actinidia02863 Actinidia chinensis HOM05D004324 ORTHO05D004840 6.0e-32 142.5 108 64.8
Duzib177G0443 Durio zibethinus HOM05D004324 ORTHO05D004840 2.3e-31 140.6 101 74.3
MD02G1206500 Malus domestica HOM05D004324 ORTHO05D004840 3.7e-29 133.3 74 82.4
CAN.G112.16 Capsicum annuum HOM05D004324 ORTHO05D004840 6.2e-29 132.5 87 73.6
SEGI_10460 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 2.4e-28 130.6 110 60.0
CAN.G23.23 Capsicum annuum HOM05D004324 ORTHO05D004840 2.6e-27 127.1 78 74.4
Duzib106G1980 Durio zibethinus HOM05D004324 ORTHO05D004840 4.3e-22 109.8 95 58.9
Sc26g0001260 Simmondsia chinensis HOM05D004324 ORTHO05D004840 3.1e-20 103.6 127 52.0
Prupe.7G087800 Prunus persica HOM05D004324 ORTHO05D004840 4.0e-20 103.2 124 53.2
Actinidia02867 Actinidia chinensis HOM05D004324 ORTHO05D004840 1.1e-17 95.1 114 48.2
MCO07G634 Micromonas commoda HOM05D004324 ORTHO05D004840 1.4e-17 94.7 301 27.2
Psat0s13993g0040 Pisum sativum HOM05D004324 ORTHO05D004840 4.2e-17 93.2 74 63.5
Actinidia31395 Actinidia chinensis HOM05D004324 ORTHO05D004840 6.0e-16 89.4 86 54.7
Ca_28979_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 7.9e-16 89.0 285 28.8
Cfa025533 Carpinus fangiana HOM05D000146 ORTHO05D004840 1.8e-15 87.8 324 26.2
Pp3s30_709 Physcomitrium patens HOM05D004324 ORTHO05D004840 2.3e-15 87.4 231 29.4
Cfa023222 Carpinus fangiana HOM05D004324 ORTHO05D004840 4.1e-12 76.6 268 28.7
Prupe.2G076400 Prunus persica HOM05D004324 ORTHO05D004840 1.4e-09 68.2 53 67.9
Actinidia02866 Actinidia chinensis HOM05D004324 ORTHO05D004840 3.2e-09 67.0 103 43.7
Cfa024978 Carpinus fangiana HOM05D004324 ORTHO05D034102 6.1e-08 62.8 195 26.7
Aa31sc49G50 Aethionema arabicum HOM05D004324 ORTHO05D004840 1.4e-07 61.6 45 66.7
Medtr4g019730 Medicago truncatula HOM05D000814 ORTHO05D004840 6.7e-07 59.3 42 66.7


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