Gene: AT4G04580

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G04580
  • Transcript Identifier AT4G04580.1
  • Gene Type Coding gene
  • Location Chr4 : 2293761-2294906 : negative

Gene Family Information

  • ID HOM05D000317
  • #Genes/#Species 1458/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G04580.1
  • uniprot Q9XEB2

Descriptions

  • Description Homeodomain-like superfamily protein
  • Computational description Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G42660.1); Has 1575 Blast hits to 1573 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1562; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
TAS
Gene Ontologyregulation of transcription, DNA-templated1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity1
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017930 Myb domain
IPR006447 Myb domain, plants
IPR044848 PHR1-like
IPR009057 Homeobox-like domain superfamily
Mapman id Description
35.1 not assigned.annotated