Gene: AT4G03200

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G03200
  • Transcript Identifier AT4G03200.2
  • Gene Type Coding gene
  • Location Chr4 : 1409318-1412566 : positive

Gene Family Information

  • ID HOM05D000161
  • #Genes/#Species 2285/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G03200.2
  • uniprot F4JI63

Descriptions

  • Description catalytics
  • Computational description catalytics; FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF255 (InterPro:IPR004879), Thioredoxin fold (InterPro:IPR012335), Six-hairpin glycosidase-like (InterPro:IPR008928), Thioredoxin-like fold (InterPro:IPR012336); Has 2655 Blast hits to 2648 proteins in 674 species: Archae - 139; Bacteria - 1128; Metazoa - 120; Fungi - 75; Plants - 31; Viruses - 0; Other Eukaryotes - 1162 (source: NCBI BLink).
  • Computational description catalytics; FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF255 (InterPro:IPR004879), Six-hairpin glycosidase-like (InterPro:IPR008928), Thioredoxin-like fold (InterPro:IPR012336); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
Gene Ontologycarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0006355
ISO
PLAZA Homology (enrichment)regulation of transcription, DNA-templated HOM05D000161

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003690
ISO
PLAZA Homology (enrichment)double-stranded DNA binding HOM05D000161

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
ISM, IBA
Gene Ontologychloroplast1 2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008928 Six-hairpin glycosidase superfamily
IPR024705 Spermatogenesis-associated protein 20
IPR004879 Domain of unknown function DUF255
IPR036249 Thioredoxin-like superfamily
Mapman id Description
35.1 not assigned.annotated